Strain Fitness in Bacteroides stercoris CC31F around HMPREF1181_RS10690

Experiment: Inulin from chicory 2.5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Inulin from chicory 2.5 mg/mL (C)
122,482	-		HMPREF1181_RS10685	0.56	+0.6
122,487	+		HMPREF1181_RS10685	0.57	-0.1
122,487	+		HMPREF1181_RS10685	0.57	-2.1
122,487	+		HMPREF1181_RS10685	0.57	-3.4
122,528	-		HMPREF1181_RS10685	0.59	+0.3
122,676	+		HMPREF1181_RS10685	0.68	-2.2
122,677	-		HMPREF1181_RS10685	0.68	+0.5
122,852	+		HMPREF1181_RS10685	0.78	-2.8
122,853	-		HMPREF1181_RS10685	0.78	+0.6
122,925	+		HMPREF1181_RS10685	0.82	-0.1
122,926	-		HMPREF1181_RS10685	0.83	+0.6
122,960	-		HMPREF1181_RS10685	0.85	+2.1
122,982	-		HMPREF1181_RS10685	0.86	+0.4
123,044	+		HMPREF1181_RS10685	0.89	+1.0
123,161	+				+0.5
123,208	+				+0.3
123,214	+				-4.1
123,229	-				-2.2
123,259	+				-3.8
123,332	+				+0.3
123,510	+				+0.8
123,558	+		HMPREF1181_RS10690	0.13	+0.1
123,559	-		HMPREF1181_RS10690	0.13	-2.6
123,583	+		HMPREF1181_RS10690	0.16	+0.9
123,604	-		HMPREF1181_RS10690	0.17	-2.1
123,604	-		HMPREF1181_RS10690	0.17	-1.0
123,641	+		HMPREF1181_RS10690	0.21	+1.3
123,655	-		HMPREF1181_RS10690	0.22	-0.4
123,690	+		HMPREF1181_RS10690	0.25	-0.5
123,753	-		HMPREF1181_RS10690	0.31	+0.5
123,753	-		HMPREF1181_RS10690	0.31	+0.0
123,801	-		HMPREF1181_RS10690	0.35	-2.4
123,801	-		HMPREF1181_RS10690	0.35	-0.5
123,827	+		HMPREF1181_RS10690	0.38	-0.6
123,827	+		HMPREF1181_RS10690	0.38	-0.4
123,827	+		HMPREF1181_RS10690	0.38	-2.6
123,828	-		HMPREF1181_RS10690	0.38	+0.7
124,027	-		HMPREF1181_RS10690	0.56	-3.0
124,039	+		HMPREF1181_RS10690	0.57	-2.6
124,054	+		HMPREF1181_RS10690	0.58	+0.1
124,066	-		HMPREF1181_RS10690	0.59	+0.3
124,066	-		HMPREF1181_RS10690	0.59	+0.7
124,130	+		HMPREF1181_RS10690	0.65	-2.2
124,160	+		HMPREF1181_RS10690	0.68	-0.5
124,272	+		HMPREF1181_RS10690	0.78	-0.6
124,272	+		HMPREF1181_RS10690	0.78	+1.0
124,272	+		HMPREF1181_RS10690	0.78	-1.5
124,273	-		HMPREF1181_RS10690	0.78	-2.4
124,273	-		HMPREF1181_RS10690	0.78	+1.2
124,381	+		HMPREF1181_RS10690	0.88	-0.1
124,409	+				-0.2
124,410	-				+0.4
124,410	-				+0.6
124,465	-				+0.6
124,466	+				+0.5
124,516	-				-0.2
124,516	-				-2.7
124,592	+				+0.2
124,594	+				-1.2
124,594	+				-0.1
124,614	-				+0.8
124,666	+				-3.6
124,676	-				-3.2
124,676	-				+0.5
124,679	+				-0.7
124,680	-				-2.8
124,740	+				+0.2
124,790	-		HMPREF1181_RS10695	0.13	-3.3
124,862	-		HMPREF1181_RS10695	0.19	+0.8
124,904	+		HMPREF1181_RS10695	0.22	+0.2
124,905	-		HMPREF1181_RS10695	0.22	-0.3
124,905	-		HMPREF1181_RS10695	0.22	+1.0
124,954	-		HMPREF1181_RS10695	0.27	-0.5
124,994	+		HMPREF1181_RS10695	0.30	-0.1
125,146	+		HMPREF1181_RS10695	0.42	-0.5
125,146	+		HMPREF1181_RS10695	0.42	-1.4
125,147	-		HMPREF1181_RS10695	0.42	-1.1
125,166	+		HMPREF1181_RS10695	0.44	+0.2
125,167	-		HMPREF1181_RS10695	0.44	-1.2
125,196	+		HMPREF1181_RS10695	0.46	+0.5
125,203	+		HMPREF1181_RS10695	0.47	+1.4
125,203	+		HMPREF1181_RS10695	0.47	+0.4
125,204	-		HMPREF1181_RS10695	0.47	-2.8
125,217	+		HMPREF1181_RS10695	0.48	+0.3
125,226	-		HMPREF1181_RS10695	0.49	-4.9
125,289	+		HMPREF1181_RS10695	0.54	-3.1
125,368	+		HMPREF1181_RS10695	0.61	+0.4
125,403	-		HMPREF1181_RS10695	0.63	+0.1
125,421	-		HMPREF1181_RS10695	0.65	+0.6
125,489	+		HMPREF1181_RS10695	0.71	+0.4