Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS09195

Experiment: Experiment:TE2, Cucumber 1 Main Stem (TE2-S-C1-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 1 Main Stem (TE2-S-C1-MS)
1,730,431	+	moaB	LU632_RS09180	0.57	-0.8
1,730,431	+	moaB	LU632_RS09180	0.57	+2.7
1,730,431	+	moaB	LU632_RS09180	0.57	-0.6
1,730,432	-	moaB	LU632_RS09180	0.57	+1.7
1,730,432	-	moaB	LU632_RS09180	0.57	+0.7
1,730,432	-	moaB	LU632_RS09180	0.57	-1.6
1,730,432	-	moaB	LU632_RS09180	0.57	+1.3
1,730,553	-	moaB	LU632_RS09180	0.81	-3.6
1,730,697	-				+1.7
1,730,697	-				-2.2
1,730,890	+	moaC	LU632_RS09185	0.48	+1.7
1,731,033	+	moaC	LU632_RS09185	0.78	+4.4
1,731,033	+	moaC	LU632_RS09185	0.78	-1.2
1,731,034	-	moaC	LU632_RS09185	0.78	+0.7
1,731,038	+	moaC	LU632_RS09185	0.79	+2.3
1,731,039	-	moaC	LU632_RS09185	0.79	+2.3
1,731,039	-	moaC	LU632_RS09185	0.79	-1.4
1,731,039	-	moaC	LU632_RS09185	0.79	-1.6
1,731,093	-				+5.1
1,731,376	+				+0.6
1,731,376	+				+3.5
1,731,376	+				-0.4
1,731,377	-				-1.4
1,731,539	+	moaE	LU632_RS09195	0.29	-2.5
1,731,830	+				-1.0
1,731,830	+				+1.7
1,732,059	+				+1.7
1,732,156	-				-2.4
1,732,171	+				+1.1
1,732,172	-				-2.1
1,732,186	+				+1.2
1,732,502	+		LU632_RS09200	0.35	+0.3
1,732,503	-		LU632_RS09200	0.35	+1.2
1,732,503	-		LU632_RS09200	0.35	+1.7
1,732,571	-		LU632_RS09200	0.42	+0.7
1,732,572	+		LU632_RS09200	0.42	+4.7
1,732,572	+		LU632_RS09200	0.42	+0.6
1,732,572	+		LU632_RS09200	0.42	+1.7
1,732,572	+		LU632_RS09200	0.42	-3.3
1,732,573	-		LU632_RS09200	0.42	+1.1
1,732,711	-		LU632_RS09200	0.54	-2.5
1,732,711	-		LU632_RS09200	0.54	-0.3
1,732,817	+		LU632_RS09200	0.64	-0.6
1,732,817	+		LU632_RS09200	0.64	+0.0