Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS06995

Experiment: Experiment:TE2, Cucumber 1 Petiole 2 (TE2-S-C1-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 1 Petiole 2 (TE2-S-C1-P2)
1,332,060	+		LU632_RS06985	0.66	-2.3
1,332,228	-				+3.8
1,332,301	-				-2.9
1,332,415	+				+0.9
1,332,416	-				-0.4
1,332,493	+		LU632_RS06990	0.26	-1.7
1,332,524	-		LU632_RS06990	0.32	+1.0
1,332,559	+		LU632_RS06990	0.39	-2.3
1,332,591	-		LU632_RS06990	0.46	-2.6
1,332,711	+		LU632_RS06990	0.70	+2.4
1,332,712	-		LU632_RS06990	0.70	+0.5
1,332,959	-		LU632_RS06995	0.38	-3.5
1,332,970	+		LU632_RS06995	0.42	-1.4
1,333,103	-				+1.3
1,333,186	+				+2.7
1,333,201	-				-1.8
1,333,219	+				+0.9
1,333,220	-				+2.3
1,333,246	+				+0.4
1,333,246	+				+2.5
1,333,247	-				-0.7
1,333,320	-				+2.3
1,333,342	-				+1.7
1,333,529	+				+0.4
1,333,529	+				+1.0
1,333,529	+				-0.2