Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS20005

Experiment: Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)
3,806,746	-				+0.0
3,806,756	+				+1.1
3,806,757	-				-0.3
3,806,758	+				+1.5
3,806,758	+				+0.2
3,806,901	-				-1.7
3,806,906	+				-0.2
3,807,040	+	dgt	LU632_RS20005	0.18	-1.4
3,807,071	-	dgt	LU632_RS20005	0.20	-2.8
3,807,112	-	dgt	LU632_RS20005	0.23	+2.3
3,807,112	-	dgt	LU632_RS20005	0.23	+2.4
3,807,147	+	dgt	LU632_RS20005	0.25	+0.8
3,807,184	+	dgt	LU632_RS20005	0.28	+0.4
3,807,216	-	dgt	LU632_RS20005	0.30	-0.7
3,807,480	-	dgt	LU632_RS20005	0.47	-0.6
3,807,512	+	dgt	LU632_RS20005	0.49	+0.6
3,807,513	-	dgt	LU632_RS20005	0.50	+2.0
3,807,514	+	dgt	LU632_RS20005	0.50	+0.7
3,807,515	-	dgt	LU632_RS20005	0.50	+0.7
3,807,515	-	dgt	LU632_RS20005	0.50	+1.4
3,807,515	-	dgt	LU632_RS20005	0.50	-1.2
3,807,515	-	dgt	LU632_RS20005	0.50	-2.1
3,807,535	+	dgt	LU632_RS20005	0.51	+0.6
3,807,535	+	dgt	LU632_RS20005	0.51	+0.5
3,807,592	+	dgt	LU632_RS20005	0.55	+0.4
3,807,663	-	dgt	LU632_RS20005	0.59	+1.1
3,807,664	+	dgt	LU632_RS20005	0.59	-1.8
3,807,665	-	dgt	LU632_RS20005	0.60	+2.1
3,807,668	+	dgt	LU632_RS20005	0.60	-2.2
3,807,669	-	dgt	LU632_RS20005	0.60	-1.0
3,807,669	-	dgt	LU632_RS20005	0.60	-0.2
3,807,669	-	dgt	LU632_RS20005	0.60	-2.2
3,807,669	-	dgt	LU632_RS20005	0.60	-0.3
3,807,691	+	dgt	LU632_RS20005	0.61	+0.3
3,807,691	+	dgt	LU632_RS20005	0.61	+1.3
3,807,691	+	dgt	LU632_RS20005	0.61	+0.6
3,807,692	-	dgt	LU632_RS20005	0.61	-2.5
3,807,701	+	dgt	LU632_RS20005	0.62	+2.7
3,807,716	+	dgt	LU632_RS20005	0.63	-1.5
3,807,717	-	dgt	LU632_RS20005	0.63	+0.8
3,807,777	-	dgt	LU632_RS20005	0.67	-0.9
3,808,025	+	dgt	LU632_RS20005	0.83	+0.0
3,808,025	+	dgt	LU632_RS20005	0.83	+0.5
3,808,299	+				+0.1
3,808,313	-				-0.3
3,808,330	+				-1.7
3,808,331	-				+1.0
3,808,335	+				-1.0
3,808,386	+				+1.7
3,808,386	+				+0.5
3,808,387	-				+0.5
3,808,398	-				+1.2
3,808,411	+				+0.1
3,808,411	+				-0.3
3,808,412	-				-2.9
3,808,418	+				+1.3
3,808,420	+				-0.9
3,808,420	+				+0.4
3,809,145	+				+0.3
3,809,145	+				+0.3
3,809,145	+				-1.0
3,809,145	+				+1.7
3,809,146	-				-1.7
3,809,146	-				-1.1
3,809,146	-				-1.7
3,809,146	-				-0.8
3,809,155	+				-2.1
3,809,156	-				+1.2
3,809,233	+				+0.9
3,809,259	+				-1.2