Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS19570

Experiment: Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)
3,709,509	-		LU632_RS19560	0.36	-1.9
3,709,509	-		LU632_RS19560	0.36	-0.1
3,709,610	-		LU632_RS19560	0.49	+3.1
3,709,610	-		LU632_RS19560	0.49	+0.4
3,709,729	+		LU632_RS19560	0.64	-0.6
3,709,729	+		LU632_RS19560	0.64	-2.1
3,709,906	+		LU632_RS19560	0.87	+0.7
3,709,932	+				+0.1
3,709,933	-				-0.8
3,709,987	+				-1.7
3,710,011	-				+1.1
3,710,011	-				+1.1
3,710,050	+		LU632_RS19565	0.16	+1.5
3,710,064	-		LU632_RS19565	0.22	-1.3
3,710,064	-		LU632_RS19565	0.22	-0.7
3,710,232	-				+3.2
3,710,262	+				+0.8
3,710,300	+				+0.6
3,710,499	+		LU632_RS19570	0.19	-1.0
3,710,549	+		LU632_RS19570	0.28	+0.4
3,710,554	-		LU632_RS19570	0.29	-0.2
3,710,614	-		LU632_RS19570	0.41	-2.7
3,710,614	-		LU632_RS19570	0.41	-1.2
3,710,699	-		LU632_RS19570	0.58	-2.9
3,710,714	+		LU632_RS19570	0.61	+0.1
3,710,715	-		LU632_RS19570	0.61	-0.1
3,710,860	-		LU632_RS19570	0.90	-0.5
3,710,862	+				-0.5
3,710,862	+				+1.1
3,710,863	-				+0.9
3,710,909	+				+0.3
3,710,914	+				-0.5
3,710,914	+				-0.9
3,710,915	-				+1.2
3,710,964	-				+0.2
3,710,964	-				+0.2
3,711,079	-				-0.2
3,711,079	-				-1.2
3,711,079	-				-2.4
3,711,079	-				+0.5
3,711,082	+				+0.3
3,711,083	-				-1.1
3,711,208	+				+0.8
3,711,209	-				+0.0
3,711,221	+				+1.1
3,711,222	-				-1.5
3,711,246	+				+0.8
3,711,305	-				-2.8