Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS19295

Experiment: Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)
3,648,103	+				+0.8
3,648,147	+				+1.5
3,648,189	-				-1.6
3,648,206	+				+1.1
3,648,207	-				-1.3
3,648,210	-				-0.7
3,648,486	-	rsmD	LU632_RS19285	0.53	-3.0
3,648,505	-	rsmD	LU632_RS19285	0.56	-1.7
3,648,590	-	rsmD	LU632_RS19285	0.70	-0.4
3,648,630	+	rsmD	LU632_RS19285	0.77	-0.6
3,648,717	+				-0.0
3,648,726	+				+1.1
3,648,728	+				-1.4
3,648,855	-		LU632_RS19290	0.34	+1.8
3,648,949	-		LU632_RS19290	0.69	-1.3
3,649,137	+		LU632_RS19295	0.12	-1.3
3,649,221	-		LU632_RS19295	0.37	+2.3
3,649,494	-				-0.1
3,649,723	+				+0.1
3,649,723	+				-0.9
3,649,724	-				+1.5
3,649,724	-				-0.5
3,649,724	-				+0.6
3,649,738	+				-2.4
3,649,784	+		LU632_RS19300	0.16	-0.4
3,649,785	-		LU632_RS19300	0.17	-1.3
3,649,906	-		LU632_RS19300	0.36	-1.5
3,649,949	-		LU632_RS19300	0.43	-0.3
3,649,949	-		LU632_RS19300	0.43	-1.9
3,649,950	+		LU632_RS19300	0.43	+1.3
3,649,958	-		LU632_RS19300	0.44	+0.3
3,649,958	-		LU632_RS19300	0.44	+2.6
3,649,971	+		LU632_RS19300	0.46	-2.7
3,650,030	+		LU632_RS19300	0.56	+1.1
3,650,031	-		LU632_RS19300	0.56	+0.2
3,650,064	-		LU632_RS19300	0.61	+1.5
3,650,064	-		LU632_RS19300	0.61	+1.1
3,650,064	-		LU632_RS19300	0.61	-1.7
3,650,099	+		LU632_RS19300	0.67	-0.5
3,650,206	+		LU632_RS19300	0.84	+0.3
3,650,264	-				-0.5
3,650,281	-				+1.6
3,650,289	-				+0.1
3,650,299	+				+3.2
3,650,300	-				+0.8
3,650,369	-				-1.5
3,650,419	+				-0.1