Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS19205

Experiment: Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)
3,633,136	+		LU632_RS19200	0.18	-0.1
3,633,208	+		LU632_RS19200	0.35	+3.3
3,633,370	+		LU632_RS19200	0.73	+1.3
3,633,393	+		LU632_RS19200	0.78	+0.0
3,633,394	-		LU632_RS19200	0.79	-2.1
3,633,450	-				+0.9
3,633,503	+				+0.2
3,633,631	-				+0.6
3,633,786	+				+0.3
3,633,789	+				+2.7
3,633,832	+				-2.2
3,633,859	+				-1.0
3,633,859	+				-1.8
3,633,859	+				-0.2
3,633,894	+				+1.2
3,633,956	+				+0.3
3,633,957	-				-0.6
3,634,015	-		LU632_RS19205	0.24	-2.0
3,634,069	-		LU632_RS19205	0.42	-1.6
3,634,098	+		LU632_RS19205	0.51	-2.1
3,634,099	-		LU632_RS19205	0.51	-1.1
3,634,136	+		LU632_RS19205	0.64	+1.0
3,634,136	+		LU632_RS19205	0.64	-3.1
3,634,143	+		LU632_RS19205	0.66	-1.0
3,634,300	+				+1.5
3,634,301	-				+0.0
3,634,358	+				+1.6
3,634,373	+				+0.8
3,634,439	+				+1.0
3,634,440	-				+0.9
3,634,440	-				-0.8
3,634,443	+				+2.2
3,634,444	-				+0.0
3,634,549	+	ugpQ	LU632_RS19210	0.16	-0.4
3,634,611	-	ugpQ	LU632_RS19210	0.24	+2.6
3,634,841	+	ugpQ	LU632_RS19210	0.54	-2.1
3,634,842	-	ugpQ	LU632_RS19210	0.54	+1.2
3,634,842	-	ugpQ	LU632_RS19210	0.54	+0.0
3,635,081	+	ugpQ	LU632_RS19210	0.85	-1.8
3,635,082	-	ugpQ	LU632_RS19210	0.86	+1.0
3,635,082	-	ugpQ	LU632_RS19210	0.86	-0.3