Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS18370

Experiment: Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)
3,470,333	+	bolA	LU632_RS18360	0.63	-2.8
3,470,334	-	bolA	LU632_RS18360	0.64	+2.7
3,470,447	+				+1.1
3,470,454	-				-0.8
3,470,500	+				+0.9
3,470,501	-				-1.0
3,470,558	+				+1.4
3,470,593	+				-2.7
3,470,610	+				-0.5
3,470,701	+		LU632_RS18365	0.15	+0.0
3,470,731	+		LU632_RS18365	0.20	+0.2
3,470,815	-		LU632_RS18365	0.35	-0.1
3,470,891	+		LU632_RS18365	0.48	-0.6
3,470,892	-		LU632_RS18365	0.48	-0.2
3,470,945	+		LU632_RS18365	0.57	-0.3
3,470,945	+		LU632_RS18365	0.57	-1.5
3,470,946	-		LU632_RS18365	0.57	+5.6
3,470,946	-		LU632_RS18365	0.57	+1.1
3,470,946	-		LU632_RS18365	0.57	-1.9
3,470,946	-		LU632_RS18365	0.57	+0.6
3,470,980	+		LU632_RS18365	0.63	+0.3
3,470,981	-		LU632_RS18365	0.63	-2.0
3,470,981	-		LU632_RS18365	0.63	-2.8
3,470,999	-		LU632_RS18365	0.66	+0.8
3,471,032	-		LU632_RS18365	0.72	-0.8
3,471,059	+		LU632_RS18365	0.77	+0.6
3,471,060	-		LU632_RS18365	0.77	-1.3
3,471,061	+		LU632_RS18365	0.77	+0.6
3,471,067	-		LU632_RS18365	0.78	+1.0
3,471,067	-		LU632_RS18365	0.78	-1.6
3,471,067	-		LU632_RS18365	0.78	+0.1
3,471,067	-		LU632_RS18365	0.78	+1.0
3,471,264	+				+1.3
3,471,296	+				+0.2
3,471,296	+				-2.2
3,471,340	+				-0.3
3,471,462	+				-2.3
3,471,463	-				-0.6
3,471,463	-				+1.8
3,471,503	-	ampG	LU632_RS18370	0.12	-0.2
3,471,503	-	ampG	LU632_RS18370	0.12	+0.5
3,471,702	+	ampG	LU632_RS18370	0.25	-0.6
3,471,703	-	ampG	LU632_RS18370	0.26	+3.7
3,471,835	+	ampG	LU632_RS18370	0.35	+0.8
3,471,836	-	ampG	LU632_RS18370	0.35	+1.9
3,471,898	-	ampG	LU632_RS18370	0.39	+1.4
3,471,898	-	ampG	LU632_RS18370	0.39	+2.0
3,471,990	+	ampG	LU632_RS18370	0.45	+1.3
3,471,991	-	ampG	LU632_RS18370	0.45	+1.5
3,472,016	+	ampG	LU632_RS18370	0.47	-1.0
3,472,017	-	ampG	LU632_RS18370	0.47	-1.0
3,472,017	-	ampG	LU632_RS18370	0.47	-0.3
3,472,029	+	ampG	LU632_RS18370	0.48	-1.0
3,472,029	+	ampG	LU632_RS18370	0.48	-0.6
3,472,029	+	ampG	LU632_RS18370	0.48	+0.1
3,472,029	+	ampG	LU632_RS18370	0.48	-2.6
3,472,192	+	ampG	LU632_RS18370	0.59	+0.2
3,472,193	-	ampG	LU632_RS18370	0.59	-0.3
3,472,194	+	ampG	LU632_RS18370	0.59	+0.4
3,472,243	+	ampG	LU632_RS18370	0.62	-1.0
3,472,295	+	ampG	LU632_RS18370	0.66	-0.3
3,472,296	-	ampG	LU632_RS18370	0.66	-1.0
3,472,296	-	ampG	LU632_RS18370	0.66	+0.0
3,472,351	-	ampG	LU632_RS18370	0.70	+1.1
3,472,366	-	ampG	LU632_RS18370	0.71	+0.3
3,472,656	+				+1.0
3,472,788	+				+0.6
3,472,788	+				+2.9
3,472,789	-				-2.5
3,472,835	-				-0.6
3,473,002	+				+1.8
3,473,003	-				-1.9
3,473,003	-				+0.7
3,473,108	-				-0.2
3,473,180	-				+0.6
3,473,408	+				+2.0
3,473,476	+				+0.5
3,473,476	+				-1.8
3,473,477	-				+1.0
3,473,487	+				+0.9
3,473,487	+				+0.0
3,473,487	+				+0.7
3,473,488	-				-1.0
3,473,488	-				-1.3
3,473,566	+				+0.0