Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS17845
Experiment: Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2) |
---|---|---|---|---|---|
remove | |||||
3,362,482 | - | +0.6 | |||
3,362,482 | - | -2.7 | |||
3,362,788 | - | LU632_RS17845 | 0.19 | +0.7 | |
3,362,788 | - | LU632_RS17845 | 0.19 | -0.4 | |
3,363,157 | + | LU632_RS17845 | 0.36 | -0.1 | |
3,363,185 | + | LU632_RS17845 | 0.37 | +0.3 | |
3,363,187 | + | LU632_RS17845 | 0.37 | -2.0 | |
3,363,321 | - | LU632_RS17845 | 0.43 | +1.6 | |
3,363,652 | - | LU632_RS17845 | 0.59 | +0.9 | |
3,363,909 | + | LU632_RS17845 | 0.70 | -0.0 | |
3,363,912 | + | LU632_RS17845 | 0.70 | -0.7 | |
3,364,121 | - | LU632_RS17845 | 0.80 | +0.0 | |
3,364,596 | - | +0.0 | |||
3,364,746 | + | +0.5 | |||
3,364,996 | - | +0.1 | |||
3,365,238 | - | LU632_RS17850 | 0.14 | +0.6 | |
3,365,316 | + | LU632_RS17850 | 0.16 | +2.0 |
Or see this region's nucleotide sequence