Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS17780

Experiment: Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)
3,346,690	-				+2.6
3,347,459	+				-0.2
3,347,459	+				-1.2
3,347,461	+				+0.4
3,347,461	+				-0.6
3,347,462	-				+1.3
3,347,462	-				-1.7
3,347,462	-				-2.2
3,347,539	+				+0.3
3,347,561	+				+1.1
3,347,611	-				-1.0
3,347,624	-				+0.5
3,347,633	+				+0.1
3,349,265	-				+0.7
3,349,316	-				+1.0
3,349,349	+				-0.0
3,349,350	-				-0.0
3,349,504	-	bamB	LU632_RS17785	0.14	-1.3
3,349,519	+	bamB	LU632_RS17785	0.15	+0.5
3,349,628	-	bamB	LU632_RS17785	0.25	-1.3
3,349,702	-	bamB	LU632_RS17785	0.31	+1.0
3,349,727	+	bamB	LU632_RS17785	0.33	-1.0
3,349,729	+	bamB	LU632_RS17785	0.33	-2.0
3,349,729	+	bamB	LU632_RS17785	0.33	-1.3
3,349,730	-	bamB	LU632_RS17785	0.33	-1.0
3,349,741	+	bamB	LU632_RS17785	0.34	-0.0
3,349,950	+	bamB	LU632_RS17785	0.52	-2.2
3,349,950	+	bamB	LU632_RS17785	0.52	+1.0
3,349,951	-	bamB	LU632_RS17785	0.52	-0.7
3,349,951	-	bamB	LU632_RS17785	0.52	-1.3
3,349,963	-	bamB	LU632_RS17785	0.53	-1.0
3,350,021	+	bamB	LU632_RS17785	0.58	-0.3
3,350,022	-	bamB	LU632_RS17785	0.58	+1.0
3,350,022	-	bamB	LU632_RS17785	0.58	-0.0
3,350,022	-	bamB	LU632_RS17785	0.58	-1.6
3,350,025	+	bamB	LU632_RS17785	0.58	-0.0
3,350,026	-	bamB	LU632_RS17785	0.58	-0.0
3,350,026	-	bamB	LU632_RS17785	0.58	-1.4