Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS16705

Experiment: Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)
3,150,325	-		LU632_RS16690	0.72	-0.5
3,150,412	-				-0.9
3,150,517	+		LU632_RS16695	0.31	+0.3
3,150,542	-		LU632_RS16695	0.42	+1.4
3,150,542	-		LU632_RS16695	0.42	+0.6
3,150,545	+		LU632_RS16695	0.43	-1.1
3,150,545	+		LU632_RS16695	0.43	+0.5
3,150,545	+		LU632_RS16695	0.43	+0.5
3,150,545	+		LU632_RS16695	0.43	-0.1
3,150,546	-		LU632_RS16695	0.43	+1.6
3,150,546	-		LU632_RS16695	0.43	-1.9
3,150,587	+		LU632_RS16695	0.61	+2.6
3,150,600	+		LU632_RS16695	0.67	-0.1
3,150,654	+				-1.1
3,150,757	+		LU632_RS16700	0.11	+2.8
3,150,916	+		LU632_RS16700	0.39	-3.1
3,150,916	+		LU632_RS16700	0.39	+0.9
3,150,917	-		LU632_RS16700	0.39	+1.3
3,150,917	-		LU632_RS16700	0.39	+1.2
3,150,917	-		LU632_RS16700	0.39	-1.1
3,150,954	+		LU632_RS16700	0.45	-0.1
3,150,955	-		LU632_RS16700	0.45	-0.4
3,150,955	-		LU632_RS16700	0.45	-1.7
3,150,966	-		LU632_RS16700	0.47	-0.1
3,150,980	+		LU632_RS16700	0.50	-0.2
3,150,989	+		LU632_RS16700	0.51	-1.2
3,151,056	+		LU632_RS16700	0.63	-0.7
3,151,056	+		LU632_RS16700	0.63	+0.3
3,151,057	-		LU632_RS16700	0.63	-0.7
3,151,218	+				-0.1
3,151,219	-				-2.7
3,151,219	-				-2.4
3,151,259	-				+0.6
3,151,259	-				-0.1
3,151,259	-				-1.1
3,151,286	+				-1.9
3,151,286	+				-0.0
3,151,287	-				-0.3
3,151,295	+				-0.5
3,151,295	+				-3.2
3,151,296	-				-0.6
3,151,378	-		LU632_RS16705	0.14	+2.9
3,151,427	-		LU632_RS16705	0.22	+0.3
3,151,447	+		LU632_RS16705	0.26	+1.6
3,151,448	-		LU632_RS16705	0.26	+2.2
3,151,452	-		LU632_RS16705	0.26	-1.1
3,151,452	-		LU632_RS16705	0.26	+0.4
3,151,452	-		LU632_RS16705	0.26	-1.3
3,151,492	+		LU632_RS16705	0.33	+0.9
3,151,681	-		LU632_RS16705	0.64	+0.8
3,151,681	-		LU632_RS16705	0.64	+3.0
3,151,681	-		LU632_RS16705	0.64	-0.0
3,151,750	+		LU632_RS16705	0.75	+0.7
3,151,928	+		LU632_RS16710	0.24	+1.6
3,151,928	+		LU632_RS16710	0.24	+1.0
3,151,928	+		LU632_RS16710	0.24	+1.1
3,151,929	-		LU632_RS16710	0.25	+0.3
3,151,940	-		LU632_RS16710	0.29	+1.3
3,151,940	-		LU632_RS16710	0.29	-0.1
3,151,960	-		LU632_RS16710	0.37	+0.9
3,151,960	-		LU632_RS16710	0.37	-0.5
3,152,048	+		LU632_RS16710	0.72	-0.4
3,152,049	-		LU632_RS16710	0.72	-0.3
3,152,073	+		LU632_RS16710	0.82	+0.4
3,152,189	+				+0.8
3,152,206	+				+1.9
3,152,238	-				-1.4
3,152,238	-				-2.3
3,152,245	-				-1.9
3,152,486	+		LU632_RS16715	0.83	+0.9
3,152,487	-		LU632_RS16715	0.83	+1.5
3,152,506	-				+0.5
3,152,509	+				+4.6
3,152,602	-				+1.0
3,152,609	+				+0.6
3,152,628	-				-1.0
3,152,628	-				-1.8