Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS15470

Experiment: Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)
2,933,333	+		LU632_RS15465	0.79	-2.1
2,933,333	+		LU632_RS15465	0.79	+0.8
2,933,334	-		LU632_RS15465	0.80	-0.8
2,933,596	+				-0.6
2,933,597	-				-1.2
2,933,597	-				-2.0
2,933,614	+				-0.0
2,933,615	-				+1.5
2,933,615	-				-0.8
2,933,661	+				-2.4
2,933,698	-				+0.8
2,933,698	-				+1.3
2,933,780	-				-1.5
2,933,879	+				-1.5
2,933,880	-				-0.7
2,933,880	-				+0.8
2,933,907	-				-0.2
2,933,975	+				+1.5
2,933,996	+				-2.0
2,933,997	-				-0.2
2,934,107	-				-2.2
2,934,311	+				+3.3
2,934,312	-				-2.4
2,934,312	-				+1.5
2,934,341	+				-1.1
2,934,358	+		LU632_RS15470	0.11	-0.7
2,934,500	+		LU632_RS15470	0.19	-1.9
2,934,526	+		LU632_RS15470	0.21	+0.4
2,934,527	-		LU632_RS15470	0.21	-1.5
2,934,527	-		LU632_RS15470	0.21	-2.2
2,934,531	+		LU632_RS15470	0.21	+0.4
2,934,532	-		LU632_RS15470	0.21	+0.9
2,934,610	+		LU632_RS15470	0.26	-1.2
2,934,614	+		LU632_RS15470	0.26	+0.9
2,934,761	+		LU632_RS15470	0.35	+0.1
2,934,761	+		LU632_RS15470	0.35	-1.5
2,934,779	-		LU632_RS15470	0.36	-0.4
2,934,779	-		LU632_RS15470	0.36	-1.3
2,934,847	+		LU632_RS15470	0.40	+1.6
2,934,848	-		LU632_RS15470	0.40	-2.1
2,934,939	+		LU632_RS15470	0.46	+0.8
2,935,228	+		LU632_RS15470	0.63	-1.2
2,935,228	+		LU632_RS15470	0.63	+0.9
2,935,228	+		LU632_RS15470	0.63	-3.2
2,935,229	-		LU632_RS15470	0.63	-3.0
2,935,229	-		LU632_RS15470	0.63	+0.6
2,935,232	+		LU632_RS15470	0.63	+0.6
2,935,233	-		LU632_RS15470	0.63	-0.2
2,935,274	-		LU632_RS15470	0.66	-0.2
2,935,274	-		LU632_RS15470	0.66	+0.2
2,935,395	+		LU632_RS15470	0.73	-1.8
2,935,452	+		LU632_RS15470	0.76	+0.3
2,935,485	+		LU632_RS15470	0.78	+0.2
2,935,686	-				-0.1
2,935,834	+				+0.2
2,935,849	+				-1.5
2,935,849	+				-0.4
2,935,849	+				-1.5
2,935,849	+				-0.2
2,935,850	-				+0.9
2,935,913	-		LU632_RS15475	0.12	-0.4
2,936,015	+		LU632_RS15475	0.31	-1.5
2,936,016	-		LU632_RS15475	0.31	+1.3
2,936,106	+		LU632_RS15475	0.48	+1.0
2,936,376	+				-0.2
2,936,805	+		LU632_RS15480	0.60	-1.2
2,936,806	-		LU632_RS15480	0.60	-1.4