Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS15145

Experiment: Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)
2,868,873	-		LU632_RS15135	0.33	-1.4
2,868,905	-		LU632_RS15135	0.38	+0.8
2,869,140	-		LU632_RS15135	0.68	+0.8
2,869,223	+		LU632_RS15135	0.79	-2.4
2,869,224	-		LU632_RS15135	0.79	-1.8
2,869,224	-		LU632_RS15135	0.79	-0.8
2,869,264	+		LU632_RS15135	0.84	+1.0
2,869,343	-				+1.9
2,869,396	-				+0.8
2,869,441	-		LU632_RS15140	0.11	+0.7
2,869,462	+		LU632_RS15140	0.18	+1.8
2,869,462	+		LU632_RS15140	0.18	+1.6
2,869,462	+		LU632_RS15140	0.18	+0.3
2,869,463	-		LU632_RS15140	0.18	+0.3
2,869,474	-		LU632_RS15140	0.22	-0.2
2,869,515	+		LU632_RS15140	0.36	-2.8
2,869,545	-		LU632_RS15140	0.47	+1.0
2,869,545	-		LU632_RS15140	0.47	-1.3
2,869,545	-		LU632_RS15140	0.47	-0.8
2,869,598	+		LU632_RS15140	0.66	+0.0
2,869,599	-		LU632_RS15140	0.66	-3.7
2,869,621	+		LU632_RS15140	0.74	+1.4
2,869,622	-		LU632_RS15140	0.74	+0.6
2,869,645	+		LU632_RS15140	0.82	-0.5
2,869,702	+				+0.8
2,869,706	+				-1.3
2,869,706	+				+0.6
2,869,706	+				+0.4
2,869,706	+				-1.2
2,869,707	-				+0.5
2,869,708	+				+0.9
2,869,709	-				+0.6
2,869,802	-		LU632_RS15145	0.10	+0.0
2,869,835	-		LU632_RS15145	0.17	-0.0
2,869,835	-		LU632_RS15145	0.17	+0.9
2,869,894	+		LU632_RS15145	0.29	-1.0
2,869,894	+		LU632_RS15145	0.29	+1.7
2,869,895	-		LU632_RS15145	0.30	+1.7
2,869,895	-		LU632_RS15145	0.30	-0.5
2,869,895	-		LU632_RS15145	0.30	-1.0
2,869,975	+		LU632_RS15145	0.46	+0.2
2,869,976	-		LU632_RS15145	0.46	-1.4
2,869,976	-		LU632_RS15145	0.46	+0.8
2,869,976	-		LU632_RS15145	0.46	-0.9
2,869,976	-		LU632_RS15145	0.46	-0.8
2,870,015	-		LU632_RS15145	0.54	+0.8
2,870,079	-		LU632_RS15145	0.67	+1.5
2,870,079	-		LU632_RS15145	0.67	+0.5
2,870,200	+				-1.2
2,870,201	-				+0.0
2,870,201	-				-2.3
2,870,234	+				-3.3
2,870,235	-				-1.2
2,870,264	-				-0.9
2,870,318	+				-0.8
2,870,370	+				-0.2
2,870,370	+				+1.5
2,870,371	-				-0.3
2,870,371	-				+2.1
2,870,426	+				-0.3
2,870,426	+				-0.8
2,870,426	+				-1.8
2,870,427	-				-0.0
2,870,468	+		LU632_RS15150	0.12	+1.8
2,870,493	+		LU632_RS15150	0.13	+0.2
2,870,494	-		LU632_RS15150	0.13	+1.1
2,870,518	-		LU632_RS15150	0.14	-0.3
2,870,525	+		LU632_RS15150	0.14	+0.8
2,870,624	+		LU632_RS15150	0.19	+0.2
2,870,625	-		LU632_RS15150	0.19	-0.2
2,870,634	-		LU632_RS15150	0.20	-1.6
2,870,821	-		LU632_RS15150	0.28	+1.0
2,870,821	-		LU632_RS15150	0.28	-2.4
2,870,821	-		LU632_RS15150	0.28	-0.5
2,870,836	-		LU632_RS15150	0.29	-1.2
2,870,836	-		LU632_RS15150	0.29	-0.4
2,870,855	+		LU632_RS15150	0.30	-2.0
2,870,856	-		LU632_RS15150	0.30	-2.4
2,870,873	+		LU632_RS15150	0.31	+1.8
2,870,916	+		LU632_RS15150	0.33	+1.2
2,870,916	+		LU632_RS15150	0.33	+0.8
2,870,916	+		LU632_RS15150	0.33	+0.8
2,870,916	+		LU632_RS15150	0.33	-3.8
2,870,916	+		LU632_RS15150	0.33	+0.6
2,870,916	+		LU632_RS15150	0.33	+0.9
2,870,916	+		LU632_RS15150	0.33	+0.4
2,870,916	+		LU632_RS15150	0.33	+0.9
2,870,917	-		LU632_RS15150	0.33	-0.5
2,870,919	+		LU632_RS15150	0.33	-0.2
2,870,988	+		LU632_RS15150	0.36	+0.4
2,870,989	-		LU632_RS15150	0.36	-1.2
2,870,989	-		LU632_RS15150	0.36	-1.5
2,870,989	-		LU632_RS15150	0.36	+0.0
2,870,989	-		LU632_RS15150	0.36	+0.1
2,871,023	+		LU632_RS15150	0.38	-2.2
2,871,023	+		LU632_RS15150	0.38	-0.2
2,871,024	-		LU632_RS15150	0.38	-1.2
2,871,024	-		LU632_RS15150	0.38	+0.8
2,871,024	-		LU632_RS15150	0.38	+1.3
2,871,025	-		LU632_RS15150	0.38	-0.8
2,871,080	+		LU632_RS15150	0.41	+0.2
2,871,111	+		LU632_RS15150	0.42	-0.5
2,871,118	-		LU632_RS15150	0.43	+1.2
2,871,129	+		LU632_RS15150	0.43	+1.4
2,871,130	-		LU632_RS15150	0.43	-2.6
2,871,213	-		LU632_RS15150	0.47	+0.8