Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS14225

Experiment: Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)
2,726,203	+		LU632_RS14220	0.47	-0.3
2,726,203	+		LU632_RS14220	0.47	-2.3
2,726,203	+		LU632_RS14220	0.47	+1.5
2,726,347	+		LU632_RS14220	0.69	-1.3
2,726,348	-		LU632_RS14220	0.69	-0.0
2,726,348	-		LU632_RS14220	0.69	+1.5
2,726,440	+		LU632_RS14220	0.83	-1.6
2,726,444	+		LU632_RS14220	0.84	+3.3
2,726,445	-		LU632_RS14220	0.84	-3.0
2,726,475	-		LU632_RS14220	0.89	+1.3
2,726,482	+		LU632_RS14220	0.90	-0.3
2,726,576	+				-0.5
2,726,576	+				+0.9
2,726,576	+				-0.4
2,726,859	-				-0.3
2,726,907	+				-0.3
2,726,910	-				+0.4
2,726,910	-				-0.0
2,726,910	-				+0.5
2,726,910	-				+0.7
2,726,910	-				+0.4
2,726,910	-				-1.8
2,726,910	-				+0.6
2,727,169	-		LU632_RS14225	0.40	+0.3
2,728,243	-		LU632_RS14235	0.84	-1.6
2,728,584	+		LU632_RS14240	0.40	+0.7
2,728,584	+		LU632_RS14240	0.40	-1.4