Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS13610

Experiment: Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)
2,599,562	+		LU632_RS13605	0.24	+0.1
2,599,562	+		LU632_RS13605	0.24	+2.1
2,599,563	-		LU632_RS13605	0.24	-0.9
2,599,565	+		LU632_RS13605	0.24	-0.3
2,599,569	+		LU632_RS13605	0.25	+0.2
2,599,570	-		LU632_RS13605	0.25	+1.0
2,599,643	+		LU632_RS13605	0.34	-0.3
2,599,643	+		LU632_RS13605	0.34	+0.3
2,599,644	-		LU632_RS13605	0.34	+2.9
2,599,644	-		LU632_RS13605	0.34	-3.1
2,599,697	+		LU632_RS13605	0.40	-2.7
2,599,710	-		LU632_RS13605	0.42	+0.6
2,599,713	-		LU632_RS13605	0.42	+1.6
2,599,752	-		LU632_RS13605	0.47	+0.0
2,599,765	-		LU632_RS13605	0.48	-2.3
2,599,852	+		LU632_RS13605	0.59	+3.3
2,599,884	+		LU632_RS13605	0.62	-1.4
2,599,926	+		LU632_RS13605	0.68	-0.3
2,599,933	-		LU632_RS13605	0.68	-3.4
2,599,946	+		LU632_RS13605	0.70	-1.9
2,599,979	-		LU632_RS13605	0.74	-0.1
2,599,979	-		LU632_RS13605	0.74	-0.6
2,600,061	+		LU632_RS13605	0.84	+0.1
2,600,062	-		LU632_RS13605	0.84	-1.9
2,600,084	+		LU632_RS13605	0.86	+2.9
2,600,164	+				-0.3
2,600,164	+				+0.5
2,600,165	-				+1.5
2,600,165	-				-2.3
2,600,165	-				-1.9
2,600,165	-				+1.0
2,600,166	+				+1.0
2,600,166	+				+1.7
2,600,187	-				+0.5
2,600,273	+				-0.2
2,600,273	+				+0.7
2,600,276	-				+0.3
2,600,371	+				-1.1
2,600,536	-		LU632_RS13610	0.12	+1.6
2,600,694	+		LU632_RS13610	0.34	+0.1
2,600,763	-		LU632_RS13610	0.44	+0.9
2,600,847	-		LU632_RS13610	0.55	+0.4
2,600,854	-		LU632_RS13610	0.56	-0.3
2,601,039	+		LU632_RS13610	0.82	+0.2
2,601,084	-		LU632_RS13610	0.89	+2.4
2,601,103	+				-3.4
2,601,139	-				+0.0
2,601,139	-				-1.6
2,601,143	-				-0.1
2,601,167	-				-1.0
2,601,169	+				-2.1
2,601,175	-				-2.3
2,601,187	-				+1.0
2,601,250	+				-1.4
2,601,251	-				+0.5
2,601,265	-				-0.9
2,601,265	-				+0.1
2,601,265	-				-1.1
2,601,332	+				-0.9
2,601,332	+				-1.6
2,601,332	+				+0.9
2,601,333	-				-0.4
2,601,336	+				+0.3
2,601,336	+				-1.1
2,601,336	+				+2.8
2,601,336	+				-0.4
2,601,337	-				+1.9
2,601,337	-				-2.1
2,601,504	+		LU632_RS13615	0.26	+1.2
2,601,504	+		LU632_RS13615	0.26	+3.7
2,601,504	+		LU632_RS13615	0.26	-0.2
2,601,581	+		LU632_RS13615	0.40	+0.2
2,601,614	-		LU632_RS13615	0.45	+0.0
2,601,730	-		LU632_RS13615	0.66	+2.5
2,601,730	-		LU632_RS13615	0.66	+0.9
2,601,835	+		LU632_RS13615	0.85	-1.3
2,601,927	+				+0.8
2,602,035	+		LU632_RS13620	0.33	+1.1
2,602,067	+		LU632_RS13620	0.46	+1.4