Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS13155

Experiment: Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)
2,510,987	-		LU632_RS13150	0.66	+0.7
2,511,142	+		LU632_RS13150	0.74	+0.5
2,511,194	-		LU632_RS13150	0.77	-0.9
2,511,194	-		LU632_RS13150	0.77	-0.1
2,511,315	+		LU632_RS13150	0.83	+0.7
2,511,315	+		LU632_RS13150	0.83	-1.9
2,511,316	-		LU632_RS13150	0.83	-0.4
2,511,394	-		LU632_RS13150	0.88	-1.3
2,511,415	+		LU632_RS13150	0.89	+0.6
2,511,468	+				-0.9
2,511,474	+				+0.4
2,511,475	-				-2.1
2,511,482	-				+0.7
2,511,666	+				+2.1
2,511,730	-				+0.0
2,511,745	-				-1.0
2,511,841	+				+0.6
2,511,862	+				-0.2
2,511,863	-				+0.1
2,511,906	+				-1.5
2,511,907	-				-1.0
2,511,914	-				-0.1
2,511,940	+				+1.7
2,511,940	+				-0.3
2,511,974	+		LU632_RS13155	0.19	+0.6
2,511,974	+		LU632_RS13155	0.19	+1.3
2,511,978	-		LU632_RS13155	0.20	+2.1
2,512,258	+				-0.0
2,512,258	+				-3.2
2,512,259	-				-0.1
2,512,268	+				+0.5
2,512,306	+				-0.5
2,512,373	-		LU632_RS13160	0.17	+0.6
2,512,436	+		LU632_RS13160	0.27	+2.1
2,512,436	+		LU632_RS13160	0.27	-0.4
2,512,437	-		LU632_RS13160	0.27	-0.7
2,512,453	+		LU632_RS13160	0.30	-2.3
2,512,453	+		LU632_RS13160	0.30	-0.0
2,512,453	+		LU632_RS13160	0.30	+0.6
2,512,513	-		LU632_RS13160	0.39	-2.3
2,512,513	-		LU632_RS13160	0.39	+1.1
2,512,674	+		LU632_RS13160	0.64	-0.8
2,512,674	+		LU632_RS13160	0.64	-2.4
2,512,674	+		LU632_RS13160	0.64	+1.1
2,512,674	+		LU632_RS13160	0.64	+0.5
2,512,675	-		LU632_RS13160	0.64	+1.0
2,512,675	-		LU632_RS13160	0.64	+1.9
2,512,703	+		LU632_RS13160	0.68	-1.9
2,512,716	+		LU632_RS13160	0.70	+1.1
2,512,716	+		LU632_RS13160	0.70	+3.6
2,512,716	+		LU632_RS13160	0.70	-2.9
2,512,717	-		LU632_RS13160	0.71	+1.7
2,512,717	-		LU632_RS13160	0.71	+0.0
2,512,811	+		LU632_RS13160	0.85	-0.9
2,512,812	-		LU632_RS13160	0.85	+0.2
2,512,839	-		LU632_RS13160	0.89	+1.2
2,512,922	-				+0.6
2,513,100	+		LU632_RS13165	0.35	-1.4
2,513,139	+		LU632_RS13165	0.54	-0.3
2,513,219	-				+3.1