Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS10790

Experiment: Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)
2,056,913	+	tagH	LU632_RS10785	0.31	-2.5
2,056,914	-	tagH	LU632_RS10785	0.31	-2.5
2,056,963	-	tagH	LU632_RS10785	0.35	-3.3
2,057,109	+	tagH	LU632_RS10785	0.48	-2.6
2,057,109	+	tagH	LU632_RS10785	0.48	-2.1
2,057,112	+	tagH	LU632_RS10785	0.48	-2.1
2,057,113	-	tagH	LU632_RS10785	0.48	-3.2
2,057,113	-	tagH	LU632_RS10785	0.48	-2.6
2,057,113	-	tagH	LU632_RS10785	0.48	-1.3
2,057,196	+	tagH	LU632_RS10785	0.55	-1.9
2,057,196	+	tagH	LU632_RS10785	0.55	-0.4
2,057,196	+	tagH	LU632_RS10785	0.55	-2.9
2,057,197	-	tagH	LU632_RS10785	0.55	-2.3
2,057,197	-	tagH	LU632_RS10785	0.55	-0.9
2,057,197	-	tagH	LU632_RS10785	0.55	-3.7
2,057,225	-	tagH	LU632_RS10785	0.58	-2.1
2,057,451	+	tagH	LU632_RS10785	0.77	-5.1
2,057,452	-	tagH	LU632_RS10785	0.77	-2.8
2,057,452	-	tagH	LU632_RS10785	0.77	-2.7
2,057,452	-	tagH	LU632_RS10785	0.77	-3.2
2,057,502	+	tagH	LU632_RS10785	0.82	-1.6
2,057,503	-	tagH	LU632_RS10785	0.82	-3.7
2,057,503	-	tagH	LU632_RS10785	0.82	-1.9
2,057,554	-	tagH	LU632_RS10785	0.86	-2.5
2,057,563	-	tagH	LU632_RS10785	0.87	-2.9
2,057,563	-	tagH	LU632_RS10785	0.87	-2.4
2,057,589	+	tagH	LU632_RS10785	0.89	-1.0
2,057,589	+	tagH	LU632_RS10785	0.89	-1.9
2,057,589	+	tagH	LU632_RS10785	0.89	-1.8
2,057,590	-	tagH	LU632_RS10785	0.89	-3.1
2,057,673	+				-2.1
2,057,706	+				-2.1
2,057,768	+				-4.6
2,057,768	+				-1.7
2,057,820	+				-0.9
2,057,843	+	tagF	LU632_RS10790	0.12	-1.3
2,057,843	+	tagF	LU632_RS10790	0.12	-3.5
2,057,844	-	tagF	LU632_RS10790	0.12	-3.3
2,057,855	+	tagF	LU632_RS10790	0.14	-1.3
2,057,856	-	tagF	LU632_RS10790	0.14	-2.7
2,057,856	-	tagF	LU632_RS10790	0.14	-4.4
2,057,905	+	tagF	LU632_RS10790	0.21	-2.7
2,057,905	+	tagF	LU632_RS10790	0.21	-0.9
2,057,906	-	tagF	LU632_RS10790	0.21	-3.4
2,057,906	-	tagF	LU632_RS10790	0.21	-1.9
2,057,967	+	tagF	LU632_RS10790	0.30	-3.0
2,057,993	+	tagF	LU632_RS10790	0.34	-2.4
2,057,993	+	tagF	LU632_RS10790	0.34	-0.3
2,058,136	-	tagF	LU632_RS10790	0.54	+4.0
2,058,136	-	tagF	LU632_RS10790	0.54	-3.4
2,058,237	+	tagF	LU632_RS10790	0.69	-1.1
2,058,331	+	tagF	LU632_RS10790	0.82	-0.3
2,058,357	-	tagF	LU632_RS10790	0.86	-2.7
2,058,428	-				-1.5
2,058,459	+				-1.9
2,058,459	+				-0.9
2,058,460	-				-2.6
2,058,506	+				-2.0
2,058,530	+				-1.6
2,058,530	+				-2.1
2,058,535	+				-2.1
2,058,639	-				-1.3
2,058,717	+	tssM	LU632_RS10795	0.12	+0.6
2,058,717	+	tssM	LU632_RS10795	0.12	+2.9
2,058,718	-	tssM	LU632_RS10795	0.12	-0.6
2,058,718	-	tssM	LU632_RS10795	0.12	+1.5
2,058,744	+	tssM	LU632_RS10795	0.14	+0.7
2,058,744	+	tssM	LU632_RS10795	0.14	+1.2
2,058,859	-	tssM	LU632_RS10795	0.19	-2.5
2,058,860	+	tssM	LU632_RS10795	0.19	+0.9
2,058,861	-	tssM	LU632_RS10795	0.19	-1.6
2,059,061	+	tssM	LU632_RS10795	0.29	+2.3
2,059,081	+	tssM	LU632_RS10795	0.29	-0.3
2,059,081	+	tssM	LU632_RS10795	0.29	-1.3
2,059,087	+	tssM	LU632_RS10795	0.30	-1.9
2,059,090	-	tssM	LU632_RS10795	0.30	-0.7
2,059,092	+	tssM	LU632_RS10795	0.30	+1.7
2,059,136	+	tssM	LU632_RS10795	0.32	+0.7
2,059,137	-	tssM	LU632_RS10795	0.32	+1.0
2,059,283	-	tssM	LU632_RS10795	0.39	-0.3
2,059,340	+	tssM	LU632_RS10795	0.42	-1.2