Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS10015

Experiment: Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)
1,916,420	+				-1.7
1,916,420	+				-0.4
1,916,421	-				+0.2
1,916,423	-				-2.6
1,916,478	-				+0.9
1,916,523	+				+0.4
1,916,524	-				-1.0
1,916,579	-				+0.5
1,916,651	+	sulA	LU632_RS10015	0.16	-1.5
1,916,659	-	sulA	LU632_RS10015	0.17	+0.5
1,916,674	-	sulA	LU632_RS10015	0.20	+0.4
1,916,746	+	sulA	LU632_RS10015	0.34	+0.4
1,916,786	+	sulA	LU632_RS10015	0.42	+2.1
1,916,809	-	sulA	LU632_RS10015	0.47	+1.1
1,916,911	-	sulA	LU632_RS10015	0.67	+1.2
1,916,947	-	sulA	LU632_RS10015	0.74	-1.5
1,916,947	-	sulA	LU632_RS10015	0.74	+0.8
1,916,982	+	sulA	LU632_RS10015	0.81	+0.4
1,916,983	-	sulA	LU632_RS10015	0.81	-0.6
1,917,023	+	sulA	LU632_RS10015	0.89	-1.0
1,917,024	-	sulA	LU632_RS10015	0.89	-1.7
1,917,024	-	sulA	LU632_RS10015	0.89	+0.8
1,917,024	-	sulA	LU632_RS10015	0.89	-2.4
1,917,200	+				+0.8
1,917,200	+				+0.8
1,917,201	-				-2.5
1,917,262	+				+0.8
1,917,396	-		LU632_RS10020	0.18	-0.4
1,917,455	-		LU632_RS10020	0.27	-2.4
1,917,456	+		LU632_RS10020	0.27	+2.0
1,917,457	-		LU632_RS10020	0.27	+1.9
1,917,457	-		LU632_RS10020	0.27	+0.7
1,917,459	+		LU632_RS10020	0.28	+1.8
1,917,520	+		LU632_RS10020	0.37	+1.1
1,917,564	-		LU632_RS10020	0.44	+0.7
1,917,564	-		LU632_RS10020	0.44	-2.3
1,917,599	+		LU632_RS10020	0.49	-0.5
1,917,600	-		LU632_RS10020	0.50	+1.0
1,917,756	+		LU632_RS10020	0.74	-1.6
1,917,774	+		LU632_RS10020	0.77	+0.7
1,917,782	+		LU632_RS10020	0.78	+0.8
1,917,783	-		LU632_RS10020	0.78	+1.3
1,917,827	+		LU632_RS10020	0.85	+1.1
1,917,919	+				-0.3
1,917,941	+				-2.0