Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS09325

Experiment: Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)
1,762,171	-	dld	LU632_RS09320	0.43	-0.5
1,762,298	+	dld	LU632_RS09320	0.52	-1.3
1,762,509	+	dld	LU632_RS09320	0.67	-0.6
1,762,543	-	dld	LU632_RS09320	0.69	+2.6
1,762,687	+	dld	LU632_RS09320	0.79	+0.4
1,762,687	+	dld	LU632_RS09320	0.79	+1.4
1,762,688	-	dld	LU632_RS09320	0.79	+0.7
1,762,688	-	dld	LU632_RS09320	0.79	+1.9
1,762,689	+	dld	LU632_RS09320	0.79	-0.7
1,762,689	+	dld	LU632_RS09320	0.79	+0.5
1,762,689	+	dld	LU632_RS09320	0.79	-0.7
1,762,689	+	dld	LU632_RS09320	0.79	-1.1
1,762,689	+	dld	LU632_RS09320	0.79	+1.3
1,762,689	+	dld	LU632_RS09320	0.79	-1.1
1,762,689	+	dld	LU632_RS09320	0.79	-0.3
1,762,690	-	dld	LU632_RS09320	0.79	+2.5
1,762,690	-	dld	LU632_RS09320	0.79	+2.4
1,762,690	-	dld	LU632_RS09320	0.79	+0.5
1,762,690	-	dld	LU632_RS09320	0.79	-1.4
1,762,690	-	dld	LU632_RS09320	0.79	-1.7
1,762,690	-	dld	LU632_RS09320	0.79	-1.4
1,762,995	-				+1.8
1,762,995	-				+1.3
1,763,015	-				-1.2
1,763,051	-				-0.4
1,763,082	-				+1.5
1,763,089	-				-1.8
1,763,118	+				-1.8
1,763,118	+				-0.7
1,763,129	-				+1.2
1,763,143	+				-0.8
1,763,349	+				+0.2
1,763,402	+	bglX	LU632_RS09325	0.10	+0.9
1,763,694	+	bglX	LU632_RS09325	0.23	+1.9
1,763,801	-	bglX	LU632_RS09325	0.28	+0.4
1,763,832	+	bglX	LU632_RS09325	0.29	-0.1
1,763,833	-	bglX	LU632_RS09325	0.29	+0.9
1,763,928	+	bglX	LU632_RS09325	0.33	-0.3
1,763,929	-	bglX	LU632_RS09325	0.33	-0.7
1,763,929	-	bglX	LU632_RS09325	0.33	-0.9
1,764,109	-	bglX	LU632_RS09325	0.41	-0.1
1,764,112	-	bglX	LU632_RS09325	0.41	+0.3
1,764,112	-	bglX	LU632_RS09325	0.41	-1.7
1,764,112	-	bglX	LU632_RS09325	0.41	-0.2
1,764,118	-	bglX	LU632_RS09325	0.42	-0.3
1,764,138	+	bglX	LU632_RS09325	0.42	-0.8
1,764,143	-	bglX	LU632_RS09325	0.43	+0.3
1,764,223	+	bglX	LU632_RS09325	0.46	-0.1
1,764,251	-	bglX	LU632_RS09325	0.47	-0.1
1,764,346	-	bglX	LU632_RS09325	0.51	+0.1
1,764,346	-	bglX	LU632_RS09325	0.51	-0.1
1,764,589	-	bglX	LU632_RS09325	0.62	-1.9
1,764,605	+	bglX	LU632_RS09325	0.63	-0.7
1,764,606	-	bglX	LU632_RS09325	0.63	-1.2
1,764,897	+	bglX	LU632_RS09325	0.75	+0.9
1,764,903	+	bglX	LU632_RS09325	0.76	+1.4
1,764,903	+	bglX	LU632_RS09325	0.76	-1.4
1,764,903	+	bglX	LU632_RS09325	0.76	+0.3
1,764,904	-	bglX	LU632_RS09325	0.76	-0.7
1,764,928	+	bglX	LU632_RS09325	0.77	-0.2
1,764,928	+	bglX	LU632_RS09325	0.77	-0.1
1,764,929	-	bglX	LU632_RS09325	0.77	-1.4
1,764,929	-	bglX	LU632_RS09325	0.77	-1.6
1,764,929	-	bglX	LU632_RS09325	0.77	+0.9
1,764,991	+	bglX	LU632_RS09325	0.80	+1.3
1,765,018	+	bglX	LU632_RS09325	0.81	+0.9
1,765,039	-	bglX	LU632_RS09325	0.82	-0.9
1,765,042	+	bglX	LU632_RS09325	0.82	-0.6
1,765,043	-	bglX	LU632_RS09325	0.82	+1.6
1,765,043	-	bglX	LU632_RS09325	0.82	+1.9
1,765,044	+	bglX	LU632_RS09325	0.82	-1.7
1,765,044	+	bglX	LU632_RS09325	0.82	-1.9
1,765,044	+	bglX	LU632_RS09325	0.82	-0.1
1,765,044	+	bglX	LU632_RS09325	0.82	-2.3
1,765,105	+	bglX	LU632_RS09325	0.84	+0.6
1,765,105	+	bglX	LU632_RS09325	0.84	-1.1
1,765,105	+	bglX	LU632_RS09325	0.84	+0.2
1,765,105	+	bglX	LU632_RS09325	0.84	+0.3
1,765,106	-	bglX	LU632_RS09325	0.85	-0.2
1,765,116	-	bglX	LU632_RS09325	0.85	-0.1
1,765,131	+	bglX	LU632_RS09325	0.86	-1.8
1,765,132	-	bglX	LU632_RS09325	0.86	+0.1
1,765,257	+				-0.7
1,765,296	+				+1.0
1,765,297	-				+1.4
1,765,297	-				-3.6
1,765,297	-				-1.5
1,765,338	-				-1.2
1,765,402	-				-0.2
1,765,473	+				-2.7
1,765,473	+				-0.2
1,765,474	-				+0.2
1,765,474	-				+0.1
1,765,479	+				-2.4
1,765,523	-				+0.2
1,765,523	-				+1.2
1,765,623	+				-1.9
1,765,650	+				-2.8
1,765,651	-				+0.3
1,765,651	-				-0.7
1,765,651	-				+0.8
1,765,693	+				-0.0
1,765,693	+				-1.1
1,765,694	-				+0.0
1,765,770	+				-1.4
1,765,770	+				-1.1
1,765,810	+				-0.5
1,765,810	+				-1.4
1,765,811	-				-1.4
1,765,811	-				-0.7
1,765,842	+				+1.3
1,765,843	-				+0.6
1,765,843	-				+0.2
1,765,857	+				+0.1
1,765,857	+				+0.5
1,765,899	+				-0.1
1,765,917	-				+0.8
1,765,950	+				-0.7
1,765,952	+				+1.4
1,765,952	+				-2.4
1,765,952	+				+0.4
1,766,046	+		LU632_RS09330	0.13	+3.7
1,766,111	+		LU632_RS09330	0.21	+1.7
1,766,111	+		LU632_RS09330	0.21	+0.7
1,766,283	-		LU632_RS09330	0.41	-1.9
1,766,384	+		LU632_RS09330	0.52	+2.2
1,766,385	-		LU632_RS09330	0.52	-0.6
1,766,385	-		LU632_RS09330	0.52	-1.6
1,766,429	-		LU632_RS09330	0.58	+1.5
1,766,431	+		LU632_RS09330	0.58	-1.1
1,766,432	-		LU632_RS09330	0.58	-0.1