Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS09005

Experiment: Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)
1,697,597	+				-0.5
1,697,610	-				+0.8
1,697,623	+		LU632_RS09005	0.10	-1.5
1,697,639	+		LU632_RS09005	0.12	-1.2
1,697,639	+		LU632_RS09005	0.12	-2.6
1,697,640	-		LU632_RS09005	0.12	+0.7
1,697,642	+		LU632_RS09005	0.12	+1.7
1,697,643	-		LU632_RS09005	0.12	-0.0
1,697,643	-		LU632_RS09005	0.12	+1.2
1,697,813	-		LU632_RS09005	0.28	-0.4
1,697,974	-		LU632_RS09005	0.44	+0.3
1,698,175	+		LU632_RS09005	0.63	-2.0
1,698,314	+		LU632_RS09005	0.76	-1.0
1,698,314	+		LU632_RS09005	0.76	-0.2
1,698,315	-		LU632_RS09005	0.77	-0.2
1,698,383	+		LU632_RS09005	0.83	-2.0
1,698,384	-		LU632_RS09005	0.83	+0.3
1,698,500	-				-0.9
1,698,500	-				-0.7
1,698,544	+				-0.7
1,698,544	+				+2.4
1,698,549	-				-1.5
1,698,603	-				+0.4
1,699,000	+				-0.8
1,699,001	-				+0.3
1,699,069	+		LU632_RS09010	0.17	+1.3
1,699,197	-		LU632_RS09010	0.42	+0.1
1,699,382	+		LU632_RS09010	0.78	-2.3
1,699,383	-		LU632_RS09010	0.78	-0.4
1,699,436	+		LU632_RS09010	0.88	+1.7
1,699,493	+				+1.8