Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS08995

Experiment: Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)
1,694,922	-	modC	LU632_RS08990	0.28	+0.3
1,695,111	+	modC	LU632_RS08990	0.46	+1.5
1,695,115	+	modC	LU632_RS08990	0.46	-0.1
1,695,116	-	modC	LU632_RS08990	0.46	-2.3
1,695,116	-	modC	LU632_RS08990	0.46	-2.0
1,695,127	-	modC	LU632_RS08990	0.47	-0.1
1,695,139	-	modC	LU632_RS08990	0.48	-2.9
1,695,176	+	modC	LU632_RS08990	0.52	+0.6
1,695,176	+	modC	LU632_RS08990	0.52	-1.2
1,695,177	-	modC	LU632_RS08990	0.52	+0.1
1,695,223	-	modC	LU632_RS08990	0.56	-1.0
1,695,223	-	modC	LU632_RS08990	0.56	-1.9
1,695,223	-	modC	LU632_RS08990	0.56	-0.6
1,695,223	-	modC	LU632_RS08990	0.56	+1.1
1,695,228	+	modC	LU632_RS08990	0.57	+0.5
1,695,362	+	modC	LU632_RS08990	0.69	+0.7
1,695,397	+	modC	LU632_RS08990	0.73	-0.1
1,695,397	+	modC	LU632_RS08990	0.73	-0.5
1,695,397	+	modC	LU632_RS08990	0.73	+3.7
1,695,398	-	modC	LU632_RS08990	0.73	-0.7
1,695,511	+	modC	LU632_RS08990	0.83	-1.4
1,695,555	+	modC	LU632_RS08990	0.88	-2.7
1,695,579	+	modC	LU632_RS08990	0.90	+0.7
1,695,602	-				-0.1
1,695,662	-				+1.2