Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS06835

Experiment: Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)
1,312,709	+		LU632_RS06825	0.78	-2.9
1,312,812	+				-0.1
1,312,813	-				-0.2
1,312,876	+				-0.9
1,312,996	+		LU632_RS06830	0.29	+1.5
1,313,041	+		LU632_RS06830	0.38	+5.0
1,313,041	+		LU632_RS06830	0.38	+1.7
1,313,077	+		LU632_RS06830	0.46	-1.4
1,313,078	-		LU632_RS06830	0.46	-0.3
1,313,093	+		LU632_RS06830	0.49	-0.2
1,313,093	+		LU632_RS06830	0.49	+0.2
1,313,104	+		LU632_RS06830	0.51	-0.9
1,313,154	-		LU632_RS06830	0.62	-0.1
1,313,154	-		LU632_RS06830	0.62	+1.9
1,313,261	-		LU632_RS06830	0.84	-1.1
1,313,261	-		LU632_RS06830	0.84	-0.3
1,313,276	-		LU632_RS06830	0.87	-0.1
1,313,303	-				+1.5
1,313,303	-				-0.1
1,313,303	-				+0.7
1,313,338	+				-0.7
1,313,338	+				+0.1
1,313,339	-				-3.5
1,313,339	-				+0.9
1,313,378	+				+1.1
1,313,394	+				+1.4
1,313,395	-				+2.6
1,313,398	+				-1.1
1,313,398	+				+0.7
1,313,398	+				-2.1
1,313,399	-				+0.4
1,313,399	-				-1.8
1,313,401	-				-1.1
1,313,406	+				-1.1
1,313,466	-				-0.1
1,313,670	-				-1.8
1,313,670	-				+1.1
1,313,754	+		LU632_RS06835	0.13	-0.7
1,313,789	+		LU632_RS06835	0.20	-0.4
1,313,798	-		LU632_RS06835	0.21	-0.3
1,313,809	+		LU632_RS06835	0.23	+2.5
1,313,848	+		LU632_RS06835	0.31	-1.7
1,313,923	-		LU632_RS06835	0.45	-2.1
1,313,937	-		LU632_RS06835	0.48	+0.2
1,313,961	+		LU632_RS06835	0.52	+0.3
1,313,962	-		LU632_RS06835	0.52	+0.9
1,313,962	-		LU632_RS06835	0.52	-2.6
1,313,962	-		LU632_RS06835	0.52	-2.4
1,313,965	+		LU632_RS06835	0.53	-3.3
1,313,966	-		LU632_RS06835	0.53	+1.3
1,313,966	-		LU632_RS06835	0.53	-3.5
1,314,010	+		LU632_RS06835	0.62	-0.7
1,314,011	-		LU632_RS06835	0.62	-3.2
1,314,011	-		LU632_RS06835	0.62	-0.1
1,314,015	+		LU632_RS06835	0.62	-0.2
1,314,016	-		LU632_RS06835	0.63	-1.4
1,314,018	-		LU632_RS06835	0.63	-0.6
1,314,018	-		LU632_RS06835	0.63	-0.2
1,314,018	-		LU632_RS06835	0.63	-1.4
1,314,018	-		LU632_RS06835	0.63	-1.6
1,314,046	-		LU632_RS06835	0.68	+0.9
1,314,091	-		LU632_RS06835	0.77	+0.9
1,314,091	-		LU632_RS06835	0.77	-3.1
1,314,261	-		LU632_RS06840	0.19	+0.6
1,314,377	+		LU632_RS06840	0.54	+1.4
1,314,378	-		LU632_RS06840	0.54	+1.7
1,314,811	+				-0.2
1,314,828	+				-2.1
1,314,897	-				+0.4