Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS06535

Experiment: Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)
1,257,761	-		LU632_RS06530	0.30	+5.2
1,257,908	+		LU632_RS06530	0.42	+1.1
1,257,928	+		LU632_RS06530	0.44	+2.1
1,257,962	+		LU632_RS06530	0.47	+0.9
1,257,963	-		LU632_RS06530	0.47	-0.2
1,257,972	+		LU632_RS06530	0.47	-1.1
1,257,972	+		LU632_RS06530	0.47	+1.2
1,257,972	+		LU632_RS06530	0.47	-1.4
1,257,986	+		LU632_RS06530	0.49	+1.7
1,258,027	+		LU632_RS06530	0.52	+1.5
1,258,028	-		LU632_RS06530	0.52	+0.3
1,258,083	+		LU632_RS06530	0.57	+0.6
1,258,083	+		LU632_RS06530	0.57	+0.9
1,258,083	+		LU632_RS06530	0.57	+1.4
1,258,083	+		LU632_RS06530	0.57	+0.8
1,258,084	-		LU632_RS06530	0.57	+1.5
1,258,084	-		LU632_RS06530	0.57	+1.2
1,258,084	-		LU632_RS06530	0.57	+2.0
1,258,131	-		LU632_RS06530	0.61	-2.6
1,258,195	-		LU632_RS06530	0.66	+0.3
1,258,263	+		LU632_RS06530	0.72	+1.3
1,258,263	+		LU632_RS06530	0.72	+1.4
1,258,263	+		LU632_RS06530	0.72	-3.5
1,258,263	+		LU632_RS06530	0.72	+2.9
1,258,263	+		LU632_RS06530	0.72	+2.9
1,258,263	+		LU632_RS06530	0.72	+2.3
1,258,263	+		LU632_RS06530	0.72	-0.1
1,258,263	+		LU632_RS06530	0.72	-2.1
1,258,263	+		LU632_RS06530	0.72	+1.3
1,258,263	+		LU632_RS06530	0.72	+0.3
1,258,264	-		LU632_RS06530	0.72	-2.1
1,258,264	-		LU632_RS06530	0.72	+3.8
1,258,325	-		LU632_RS06530	0.77	-2.2
1,258,325	-		LU632_RS06530	0.77	+3.2
1,258,327	+		LU632_RS06530	0.77	+1.3
1,258,327	+		LU632_RS06530	0.77	+3.0
1,258,328	-		LU632_RS06530	0.77	+0.9
1,258,328	-		LU632_RS06530	0.77	+1.4
1,258,573	+				+1.9
1,258,573	+				-0.9
1,258,573	+				+4.1
1,258,573	+				+1.4
1,258,574	-				+0.2
1,258,574	-				+2.5
1,258,574	-				+1.3
1,258,574	-				+2.7
1,258,574	-				+1.9
1,258,575	+				+1.8
1,258,575	+				+2.0
1,258,576	-				+4.9
1,258,587	+				+1.4
1,258,651	-				-0.1
1,258,747	-		LU632_RS06535	0.13	-2.5
1,258,805	-				+0.6
1,258,805	-				-1.4
1,258,807	-				+0.1
1,258,968	-				-1.7
1,259,004	-				-1.9
1,259,144	+				-1.1
1,259,155	-				+2.1
1,259,205	-				-0.8
1,259,325	+				+2.8
1,259,353	+				-0.1
1,259,353	+				+0.7
1,259,406	+				-1.7
1,259,407	-				+0.9
1,259,436	+				+2.4
1,259,615	-		LU632_RS06545	0.31	-1.0
1,259,765	+		LU632_RS06545	0.48	-1.9
1,259,791	-		LU632_RS06545	0.52	-3.3