Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS05415

Experiment: Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)
1,046,004	+	mltC	LU632_RS05410	0.17	+1.0
1,046,005	-	mltC	LU632_RS05410	0.17	-3.4
1,046,007	-	mltC	LU632_RS05410	0.17	-2.4
1,046,007	-	mltC	LU632_RS05410	0.17	-2.9
1,046,060	+	mltC	LU632_RS05410	0.22	-0.0
1,046,061	-	mltC	LU632_RS05410	0.22	-1.9
1,046,061	-	mltC	LU632_RS05410	0.22	+1.0
1,046,061	-	mltC	LU632_RS05410	0.22	-2.0
1,046,084	+	mltC	LU632_RS05410	0.24	-2.7
1,046,085	-	mltC	LU632_RS05410	0.24	-1.4
1,046,126	+	mltC	LU632_RS05410	0.28	-4.0
1,046,331	+	mltC	LU632_RS05410	0.47	-1.9
1,046,331	+	mltC	LU632_RS05410	0.47	-0.9
1,046,332	-	mltC	LU632_RS05410	0.47	-1.0
1,046,332	-	mltC	LU632_RS05410	0.47	-3.0
1,046,365	-	mltC	LU632_RS05410	0.50	-1.7
1,046,414	-	mltC	LU632_RS05410	0.55	-1.0
1,046,432	+	mltC	LU632_RS05410	0.56	+1.0
1,046,507	-	mltC	LU632_RS05410	0.63	-2.0
1,046,635	-	mltC	LU632_RS05410	0.75	-1.8
1,046,684	+	mltC	LU632_RS05410	0.80	-0.6
1,046,684	+	mltC	LU632_RS05410	0.80	-2.4
1,046,685	-	mltC	LU632_RS05410	0.80	-0.5
1,046,685	-	mltC	LU632_RS05410	0.80	+1.0
1,046,687	+	mltC	LU632_RS05410	0.80	-1.2
1,046,688	-	mltC	LU632_RS05410	0.80	-3.0
1,046,700	-	mltC	LU632_RS05410	0.81	-0.2
1,046,703	+	mltC	LU632_RS05410	0.82	-2.5
1,046,703	+	mltC	LU632_RS05410	0.82	-1.9
1,046,704	-	mltC	LU632_RS05410	0.82	-1.8
1,046,708	+	mltC	LU632_RS05410	0.82	-2.4
1,046,752	-	mltC	LU632_RS05410	0.86	-2.2
1,046,879	-				-1.5
1,046,904	+				+1.0
1,046,923	+				-0.9
1,046,923	+				-0.9
1,046,970	+				-0.8
1,047,085	-		LU632_RS05415	0.48	+1.0
1,047,085	-		LU632_RS05415	0.48	-0.6
1,047,134	+		LU632_RS05415	0.66	-0.4
1,047,138	+		LU632_RS05415	0.68	+0.8
1,047,138	+		LU632_RS05415	0.68	-1.9
1,047,138	+		LU632_RS05415	0.68	-1.2
1,047,139	-		LU632_RS05415	0.68	-0.2
1,047,226	+				+1.0
1,047,363	-	mutY	LU632_RS05420	0.15	+1.3
1,047,367	+	mutY	LU632_RS05420	0.16	+1.0
1,047,367	+	mutY	LU632_RS05420	0.16	+1.4
1,047,368	-	mutY	LU632_RS05420	0.16	+0.4
1,047,370	-	mutY	LU632_RS05420	0.16	+0.6
1,047,502	+	mutY	LU632_RS05420	0.27	-1.2
1,047,503	-	mutY	LU632_RS05420	0.27	-0.1
1,047,681	+	mutY	LU632_RS05420	0.43	-0.1
1,047,682	-	mutY	LU632_RS05420	0.43	+0.4
1,047,796	+	mutY	LU632_RS05420	0.53	-0.3
1,047,866	-	mutY	LU632_RS05420	0.59	+0.5
1,047,889	+	mutY	LU632_RS05420	0.61	-1.4
1,047,954	-	mutY	LU632_RS05420	0.66	-0.7
1,047,977	-	mutY	LU632_RS05420	0.68	-0.1
1,048,015	-	mutY	LU632_RS05420	0.72	-0.4
1,048,015	-	mutY	LU632_RS05420	0.72	-0.1
1,048,089	+	mutY	LU632_RS05420	0.78	+0.7
1,048,113	+	mutY	LU632_RS05420	0.80	-0.5
1,048,114	-	mutY	LU632_RS05420	0.80	+0.9
1,048,114	-	mutY	LU632_RS05420	0.80	+0.2
1,048,115	+	mutY	LU632_RS05420	0.80	-2.8
1,048,115	+	mutY	LU632_RS05420	0.80	-1.1
1,048,115	+	mutY	LU632_RS05420	0.80	-0.4
1,048,115	+	mutY	LU632_RS05420	0.80	+0.9
1,048,115	+	mutY	LU632_RS05420	0.80	+3.3
1,048,115	+	mutY	LU632_RS05420	0.80	+0.5
1,048,115	+	mutY	LU632_RS05420	0.80	-1.3
1,048,115	+	mutY	LU632_RS05420	0.80	-2.0
1,048,116	-	mutY	LU632_RS05420	0.81	-1.1
1,048,116	-	mutY	LU632_RS05420	0.81	-0.6
1,048,116	-	mutY	LU632_RS05420	0.81	-1.9
1,048,153	+	mutY	LU632_RS05420	0.84	-2.1
1,048,154	-	mutY	LU632_RS05420	0.84	-0.6
1,048,154	-	mutY	LU632_RS05420	0.84	-0.1
1,048,154	-	mutY	LU632_RS05420	0.84	+0.4
1,048,172	-	mutY	LU632_RS05420	0.85	+0.2