Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS04655
Experiment: Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2) |
---|---|---|---|---|---|
remove | |||||
909,860 | + | -0.6 | |||
909,926 | + | +3.6 | |||
909,927 | - | +0.4 | |||
909,950 | + | -0.6 | |||
909,969 | + | +0.1 | |||
909,969 | + | +1.0 | |||
909,973 | + | -1.8 | |||
909,974 | - | +0.6 | |||
909,993 | + | -0.4 | |||
909,993 | + | -0.0 | |||
910,073 | - | -1.0 | |||
910,093 | + | -2.2 | |||
910,093 | + | -0.6 | |||
910,094 | - | +1.4 | |||
910,171 | + | +0.3 | |||
910,172 | - | -0.2 | |||
910,272 | - | LU632_RS04650 | 0.15 | -0.3 | |
910,423 | + | LU632_RS04650 | 0.47 | +0.5 | |
910,473 | - | LU632_RS04650 | 0.58 | +0.6 | |
910,482 | - | LU632_RS04650 | 0.60 | -0.8 | |
910,670 | + | +0.1 | |||
910,671 | - | +4.2 | |||
910,680 | + | +0.9 | |||
910,716 | - | -3.2 | |||
911,509 | + | -0.6 | |||
911,572 | + | +1.0 | |||
911,572 | + | -0.0 | |||
911,572 | + | -0.5 | |||
911,572 | + | +1.1 | |||
911,573 | - | -0.0 | |||
911,573 | - | +0.2 | |||
911,573 | - | -1.0 | |||
911,676 | + | +0.4 | |||
911,676 | + | +1.6 | |||
911,676 | + | +2.5 | |||
911,698 | - | +0.7 | |||
911,698 | - | -0.3 |
Or see this region's nucleotide sequence