Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS03895

Experiment: Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)
778,552	+				+0.2
778,567	+				+1.0
778,568	-				-1.4
778,568	-				+0.7
778,782	-		LU632_RS03890	0.85	+1.5
779,099	-				+0.4
779,185	-				-0.5
779,185	-				-0.5
779,425	-				+0.1
779,446	+				+0.1
779,455	+				-1.0
779,492	+				-2.4
779,492	+				+1.1
779,492	+				-0.5
779,493	-				-0.2
779,685	+		LU632_RS03895	0.27	-0.3
779,688	-		LU632_RS03895	0.27	-1.1
779,715	+		LU632_RS03895	0.30	+1.6
779,717	+		LU632_RS03895	0.31	+1.1
779,891	-		LU632_RS03895	0.53	-0.0
779,984	+		LU632_RS03895	0.65	-1.7
780,067	+		LU632_RS03895	0.76	-1.3
780,161	+		LU632_RS03895	0.89	-0.4
780,162	-		LU632_RS03895	0.89	-0.2
780,171	+		LU632_RS03895	0.90	-1.1
780,172	-				+1.1
780,251	+				-2.2
780,251	+				-0.9
780,252	-				+1.1
780,259	-				+1.8
780,275	+				-2.9
780,313	-				+1.0
780,313	-				-0.0
780,502	-				+0.7
780,507	-				+0.1
780,890	-				+0.8
780,923	+				+1.1
780,967	+				-0.7
780,967	+				-2.6
780,968	-				+1.1
781,050	-				+1.6
781,050	-				-1.9
781,239	+				-0.4