Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS00630

Experiment: Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)
128,752	-		LU632_RS00625	0.65	-2.1
128,752	-		LU632_RS00625	0.65	-0.6
128,754	-		LU632_RS00625	0.65	-0.3
128,754	-		LU632_RS00625	0.65	-0.2
128,809	+		LU632_RS00625	0.68	-2.2
128,925	+		LU632_RS00625	0.75	-0.5
128,926	-		LU632_RS00625	0.75	+0.7
128,977	+		LU632_RS00625	0.79	+0.5
128,977	+		LU632_RS00625	0.79	-1.6
128,978	-		LU632_RS00625	0.79	+2.3
128,989	+		LU632_RS00625	0.79	-1.7
128,990	-		LU632_RS00625	0.79	-0.3
128,992	+		LU632_RS00625	0.80	-1.9
128,993	-		LU632_RS00625	0.80	-0.3
128,993	-		LU632_RS00625	0.80	+0.8
128,993	-		LU632_RS00625	0.80	+2.2
128,998	+		LU632_RS00625	0.80	-1.8
128,998	+		LU632_RS00625	0.80	+0.2
128,998	+		LU632_RS00625	0.80	-0.1
128,998	+		LU632_RS00625	0.80	-0.0
128,998	+		LU632_RS00625	0.80	-0.1
128,999	-		LU632_RS00625	0.80	+1.9
128,999	-		LU632_RS00625	0.80	-0.3
128,999	-		LU632_RS00625	0.80	-1.0
128,999	-		LU632_RS00625	0.80	+3.2
129,006	-		LU632_RS00625	0.80	+0.3
129,008	+		LU632_RS00625	0.80	+3.0
129,028	+		LU632_RS00625	0.82	-0.3
129,032	+		LU632_RS00625	0.82	+0.7
129,033	-		LU632_RS00625	0.82	+0.9
129,033	-		LU632_RS00625	0.82	-1.8
129,036	+		LU632_RS00625	0.82	-0.6
129,036	+		LU632_RS00625	0.82	+0.2
129,121	+		LU632_RS00625	0.88	-1.3
129,214	+				+2.4
129,290	-				+0.2
129,309	-				-0.8
129,320	+				-0.1
129,336	+				-0.1
129,345	+				-1.6
129,346	-				-2.6
129,360	-				-1.1
129,383	-				+3.6
129,383	-				-1.0
129,604	+				-0.7
129,604	+				-1.9
129,605	-				-0.0
129,605	-				-2.2
129,617	+				-0.3
129,617	+				-1.1
129,617	+				-0.4
129,618	-				-0.2
129,618	-				-1.3
129,618	-				+0.9
129,619	+				-0.2
129,619	+				+0.2
129,619	+				-0.6
129,619	+				-0.8
129,620	-				+1.2
129,621	+				+1.2
129,621	+				-1.6
129,621	+				+4.0
129,621	+				-1.6
129,621	+				+0.7
129,806	-	adhP	LU632_RS00630	0.16	+0.2
129,807	+	adhP	LU632_RS00630	0.16	-1.0
129,948	+	adhP	LU632_RS00630	0.30	-1.7
130,006	+	adhP	LU632_RS00630	0.36	+2.6
130,007	-	adhP	LU632_RS00630	0.36	-0.7
130,095	-	adhP	LU632_RS00630	0.44	+0.2
130,146	-	adhP	LU632_RS00630	0.50	-1.2
130,146	-	adhP	LU632_RS00630	0.50	-0.5
130,165	+	adhP	LU632_RS00630	0.51	-0.8
130,181	+	adhP	LU632_RS00630	0.53	+1.0
130,225	+	adhP	LU632_RS00630	0.57	+1.5
130,226	-	adhP	LU632_RS00630	0.57	-1.1
130,226	-	adhP	LU632_RS00630	0.57	+0.9
130,275	+	adhP	LU632_RS00630	0.62	-0.7
130,370	-	adhP	LU632_RS00630	0.72	-2.1
130,585	+				+1.6
130,586	-				-0.6
130,588	+				-0.1
130,656	-				+4.2
130,730	-				-0.3
130,855	+				+0.5
130,867	-				+0.9
130,943	+				+1.0
131,001	-				+0.2
131,022	+				-1.3
131,137	-		LU632_RS00635	0.32	+0.0
131,156	+		LU632_RS00635	0.43	+0.7
131,204	+		LU632_RS00635	0.69	-2.6
131,303	+				+0.8
131,304	-				-0.5
131,308	+				+0.8
131,309	-				-0.2
131,309	-				+0.4
131,331	-				-0.1
131,365	+				-1.8
131,365	+				+1.8
131,366	-				-1.1
131,366	-				+3.8
131,369	-				-2.2
131,396	+				+0.9
131,427	-				-2.8
131,437	-				+0.2