Experiment: Yeast Extract 2.5 mg/mL (C) complex media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HMPREF1181_RS10830 and HMPREF1181_RS10835 are separated by 10 nucleotides HMPREF1181_RS10835 and HMPREF1181_RS10840 are separated by 35 nucleotides HMPREF1181_RS10840 and HMPREF1181_RS10845 are separated by 74 nucleotides
HMPREF1181_RS10830: HMPREF1181_RS10830 - glutamine--tRNA ligase/YqeY domain fusion protein, at 153,501 to 155,240
_RS10830
HMPREF1181_RS10835: HMPREF1181_RS10835 - tetratricopeptide repeat protein, at 155,251 to 156,672
_RS10835
HMPREF1181_RS10840: HMPREF1181_RS10840 - DedA family protein, at 156,708 to 157,352
_RS10840
HMPREF1181_RS10845: HMPREF1181_RS10845 - thiol peroxidase, at 157,427 to 157,930
_RS10845
Position (kb) 155
156
157 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 155.216 kb on + strand at 155.216 kb on + strand at 155.243 kb on + strand at 155.243 kb on + strand at 155.249 kb on + strand at 155.249 kb on + strand at 155.256 kb on + strand at 155.311 kb on + strand at 155.441 kb on + strand, within HMPREF1181_RS10835 at 155.479 kb on + strand, within HMPREF1181_RS10835 at 155.479 kb on + strand, within HMPREF1181_RS10835 at 155.600 kb on + strand, within HMPREF1181_RS10835 at 155.630 kb on + strand, within HMPREF1181_RS10835 at 155.666 kb on + strand, within HMPREF1181_RS10835 at 155.671 kb on + strand, within HMPREF1181_RS10835 at 155.671 kb on + strand, within HMPREF1181_RS10835 at 155.673 kb on + strand, within HMPREF1181_RS10835 at 155.677 kb on + strand, within HMPREF1181_RS10835 at 155.677 kb on + strand, within HMPREF1181_RS10835 at 155.765 kb on + strand, within HMPREF1181_RS10835 at 155.962 kb on + strand, within HMPREF1181_RS10835 at 155.964 kb on + strand, within HMPREF1181_RS10835 at 156.069 kb on + strand, within HMPREF1181_RS10835 at 156.179 kb on + strand, within HMPREF1181_RS10835 at 156.260 kb on + strand, within HMPREF1181_RS10835 at 156.300 kb on + strand, within HMPREF1181_RS10835 at 156.300 kb on + strand, within HMPREF1181_RS10835 at 156.304 kb on + strand, within HMPREF1181_RS10835 at 156.422 kb on + strand, within HMPREF1181_RS10835 at 156.422 kb on + strand, within HMPREF1181_RS10835 at 156.422 kb on + strand, within HMPREF1181_RS10835 at 156.422 kb on + strand, within HMPREF1181_RS10835 at 156.536 kb on + strand at 156.609 kb on + strand at 156.705 kb on + strand at 156.705 kb on + strand at 156.705 kb on + strand at 156.705 kb on + strand at 157.326 kb on + strand at 157.403 kb on - strand at 157.407 kb on + strand at 157.410 kb on - strand at 157.410 kb on - strand at 157.414 kb on - strand at 157.429 kb on - strand at 157.474 kb on + strand at 157.626 kb on - strand, within HMPREF1181_RS10845
Per-strain Table
Position Strand Gene LocusTag Fraction Yeast Extract 2.5 mg/mL (C) complex media remove 155,216 + -1.0 155,216 + -1.6 155,243 + +1.9 155,243 + +2.4 155,249 + +0.8 155,249 + +2.5 155,256 + +2.5 155,311 + +2.3 155,441 + HMPREF1181_RS10835 0.13 +2.7 155,479 + HMPREF1181_RS10835 0.16 +2.6 155,479 + HMPREF1181_RS10835 0.16 +3.5 155,600 + HMPREF1181_RS10835 0.25 +3.7 155,630 + HMPREF1181_RS10835 0.27 +2.3 155,666 + HMPREF1181_RS10835 0.29 +2.1 155,671 + HMPREF1181_RS10835 0.30 +2.8 155,671 + HMPREF1181_RS10835 0.30 +1.8 155,673 + HMPREF1181_RS10835 0.30 +2.5 155,677 + HMPREF1181_RS10835 0.30 +4.3 155,677 + HMPREF1181_RS10835 0.30 +2.2 155,765 + HMPREF1181_RS10835 0.36 +2.4 155,962 + HMPREF1181_RS10835 0.50 +2.9 155,964 + HMPREF1181_RS10835 0.50 +1.8 156,069 + HMPREF1181_RS10835 0.58 +1.8 156,179 + HMPREF1181_RS10835 0.65 +2.7 156,260 + HMPREF1181_RS10835 0.71 +2.1 156,300 + HMPREF1181_RS10835 0.74 +2.4 156,300 + HMPREF1181_RS10835 0.74 +3.0 156,304 + HMPREF1181_RS10835 0.74 +1.8 156,422 + HMPREF1181_RS10835 0.82 +2.3 156,422 + HMPREF1181_RS10835 0.82 +2.7 156,422 + HMPREF1181_RS10835 0.82 +2.4 156,422 + HMPREF1181_RS10835 0.82 +1.3 156,536 + +2.0 156,609 + +1.5 156,705 + +0.2 156,705 + -0.2 156,705 + +1.5 156,705 + +0.9 157,326 + +0.3 157,403 - -0.2 157,407 + -0.2 157,410 - -0.2 157,410 - -0.1 157,414 - +0.6 157,429 - -1.8 157,474 + -1.3 157,626 - HMPREF1181_RS10845 0.39 -2.0
Or see this region's nucleotide sequence