Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS25600

Experiment: Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1)
49,407	-				+1.3
49,407	-				+0.5
49,422	-		LU632_RS25600	0.11	-1.2
49,457	+		LU632_RS25600	0.15	+0.3
49,458	-		LU632_RS25600	0.15	-2.3
49,458	-		LU632_RS25600	0.15	-3.8
49,476	+		LU632_RS25600	0.18	+0.8
49,514	+		LU632_RS25600	0.23	+0.5
49,515	-		LU632_RS25600	0.23	-1.4
49,516	+		LU632_RS25600	0.23	+0.5
49,530	+		LU632_RS25600	0.25	+0.7
49,532	+		LU632_RS25600	0.25	-1.0
49,681	-		LU632_RS25600	0.44	+1.8
49,683	-		LU632_RS25600	0.45	+1.0
49,753	+		LU632_RS25600	0.54	+3.3
49,848	+		LU632_RS25600	0.66	-0.6
49,964	+		LU632_RS25600	0.81	-1.4
50,042	+				-1.2
50,049	-				+0.6
50,052	+				+0.4
50,078	-				+0.4
50,080	+				-0.6
50,080	+				+0.8
50,080	+				-2.3
50,081	-				-1.0
50,148	+				+0.4
50,148	+				+1.7
50,149	-				-0.9
50,210	+				-1.1
50,218	-				+1.9
50,261	+				-2.1
50,261	+				-2.0
50,262	-				+1.0
50,262	-				+1.9
50,264	+				-1.4
50,264	+				+1.0
50,265	-				+0.6
50,269	-				+0.0
50,299	+				+0.4
50,402	-				-1.9
50,412	-				-2.6
50,436	+				-0.5
50,456	-				+2.7
50,459	+				+1.2
50,460	-				-1.1
50,472	-				+0.0
50,474	-				-0.7
50,552	-				+1.0
50,557	-				+1.0
50,557	-				-2.3
50,659	+				+5.3
50,660	-				-1.6