Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS25180

Experiment: Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1)
4,790,320	-		LU632_RS25175	0.11	+0.5
4,790,369	-		LU632_RS25175	0.15	+0.0
4,790,692	+		LU632_RS25175	0.45	-0.4
4,790,802	+		LU632_RS25175	0.55	-0.7
4,790,802	+		LU632_RS25175	0.55	-0.6
4,790,802	+		LU632_RS25175	0.55	-0.2
4,790,802	+		LU632_RS25175	0.55	+0.0
4,790,803	-		LU632_RS25175	0.55	+0.5
4,790,803	-		LU632_RS25175	0.55	-2.6
4,790,903	+		LU632_RS25175	0.65	+0.5
4,790,952	+		LU632_RS25175	0.69	-2.0
4,790,952	+		LU632_RS25175	0.69	+0.7
4,790,952	+		LU632_RS25175	0.69	-1.7
4,790,952	+		LU632_RS25175	0.69	-0.1
4,790,952	+		LU632_RS25175	0.69	-1.3
4,790,953	-		LU632_RS25175	0.69	+0.9
4,791,126	-		LU632_RS25175	0.85	+1.1
4,791,129	-		LU632_RS25175	0.86	-0.8
4,791,129	-		LU632_RS25175	0.86	+0.4
4,791,152	+		LU632_RS25175	0.88	+0.9
4,791,234	+				+0.5
4,791,271	+				-2.0
4,791,271	+				+0.4
4,791,272	-				-0.4
4,791,290	+				-1.1
4,791,290	+				-0.3
4,791,313	-				-0.9
4,791,337	+				+2.1
4,791,662	-		LU632_RS25180	0.66	+0.2
4,791,690	-		LU632_RS25180	0.71	+0.9
4,791,709	+		LU632_RS25180	0.74	+0.6
4,791,710	-		LU632_RS25180	0.74	+0.4
4,791,710	-		LU632_RS25180	0.74	+1.6
4,791,818	+				+0.5
4,791,819	-				-1.5
4,791,821	-				-3.2
4,791,845	+				+1.1
4,791,845	+				+0.2
4,791,846	-				+0.5
4,791,846	-				+0.7
4,791,847	+				-0.2
4,791,851	+				+1.4
4,791,851	+				+0.9
4,791,852	-				+3.1
4,791,872	-				+0.1
4,791,872	-				-0.4
4,792,001	+		LU632_RS25185	0.15	+0.9
4,792,001	+		LU632_RS25185	0.15	-0.7
4,792,002	-		LU632_RS25185	0.16	-4.3
4,792,002	-		LU632_RS25185	0.16	+0.9
4,792,023	+		LU632_RS25185	0.18	+1.2
4,792,044	-		LU632_RS25185	0.21	+0.0
4,792,199	-		LU632_RS25185	0.39	+0.7
4,792,199	-		LU632_RS25185	0.39	-0.6
4,792,412	+		LU632_RS25185	0.65	+0.0
4,792,413	-		LU632_RS25185	0.65	-0.2
4,792,413	-		LU632_RS25185	0.65	-1.5
4,792,492	+		LU632_RS25185	0.74	+0.7
4,792,531	+		LU632_RS25185	0.79	-0.6
4,792,531	+		LU632_RS25185	0.79	-3.3
4,792,532	-		LU632_RS25185	0.79	+2.1
4,792,532	-		LU632_RS25185	0.79	+1.3
4,792,532	-		LU632_RS25185	0.79	-0.7
4,792,538	-		LU632_RS25185	0.80	+1.2
4,792,541	+		LU632_RS25185	0.80	-1.7
4,792,541	+		LU632_RS25185	0.80	+0.6
4,792,542	-		LU632_RS25185	0.80	+0.7
4,792,542	-		LU632_RS25185	0.80	+1.1
4,792,542	-		LU632_RS25185	0.80	+0.4
4,792,582	+		LU632_RS25185	0.85	+0.5
4,792,582	+		LU632_RS25185	0.85	-0.6
4,792,583	-		LU632_RS25185	0.85	-2.1
4,792,583	-		LU632_RS25185	0.85	-1.5
4,792,583	-		LU632_RS25185	0.85	+0.5
4,792,583	-		LU632_RS25185	0.85	-0.7
4,792,619	+		LU632_RS25185	0.90	-1.4
4,792,619	+		LU632_RS25185	0.90	-1.1
4,792,619	+		LU632_RS25185	0.90	+1.3
4,792,619	+		LU632_RS25185	0.90	-1.3
4,792,620	-		LU632_RS25185	0.90	+0.6
4,792,622	-				-0.5
4,792,681	+				-1.3
4,792,682	-				-2.1
4,792,682	-				+0.5
4,792,682	-				+0.1
4,792,731	-				-0.4
4,792,774	+		LU632_RS25190	0.11	-0.5
4,792,774	+		LU632_RS25190	0.11	+0.3
4,792,777	-		LU632_RS25190	0.12	-0.8
4,792,802	-		LU632_RS25190	0.16	-0.1