Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS23890

Experiment: Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1)
4,554,860	-		LU632_RS23880	0.50	+1.1
4,554,899	+		LU632_RS23880	0.54	+0.6
4,554,900	-		LU632_RS23880	0.54	-1.1
4,554,979	+		LU632_RS23880	0.62	-0.5
4,554,998	+		LU632_RS23880	0.64	+0.4
4,555,003	-		LU632_RS23880	0.65	+1.0
4,555,014	-		LU632_RS23880	0.66	+0.9
4,555,200	-		LU632_RS23880	0.84	+0.2
4,555,245	-		LU632_RS23880	0.89	+1.8
4,555,393	+				+1.9
4,555,394	-				-0.7
4,555,399	+				+3.1
4,555,439	+				+0.9
4,555,439	+				+0.6
4,555,443	+				-0.5
4,555,444	-				-2.6
4,555,547	-		LU632_RS23885	0.43	+0.3
4,555,631	+		LU632_RS23885	0.74	+0.9
4,555,662	+		LU632_RS23885	0.86	-1.4
4,555,662	+		LU632_RS23885	0.86	+0.2
4,555,663	-		LU632_RS23885	0.86	-2.5
4,555,665	+		LU632_RS23885	0.87	-0.4
4,555,714	+				+0.5
4,555,715	-				+1.0
4,555,773	+				+0.0
4,556,055	-	mobA	LU632_RS23890	0.41	-1.1
4,556,055	-	mobA	LU632_RS23890	0.41	-0.7
4,556,056	+	mobA	LU632_RS23890	0.41	-0.6
4,556,057	-	mobA	LU632_RS23890	0.41	-3.0
4,556,057	-	mobA	LU632_RS23890	0.41	-1.6
4,556,128	-	mobA	LU632_RS23890	0.55	-1.6
4,556,324	-				-0.4
4,556,744	+				-1.9
4,556,749	+				-1.9
4,556,749	+				+1.9
4,556,750	-				+1.1
4,556,757	+				+0.1
4,556,762	-				-0.9
4,556,762	-				+0.2
4,556,762	-				-1.7
4,556,832	+				+0.5
4,556,889	-				+0.0