Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS21700

Experiment: Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1)
4,149,606	+				+0.8
4,149,606	+				-2.2
4,149,607	-				-0.1
4,149,680	-				-0.2
4,149,683	+				-2.2
4,149,688	-				+0.3
4,150,100	+		LU632_RS21695	0.17	-1.5
4,150,100	+		LU632_RS21695	0.17	+0.8
4,150,270	+		LU632_RS21695	0.78	+1.3
4,150,348	-				-0.8
4,150,707	+	fklB	LU632_RS21700	0.16	-2.4
4,150,847	-	fklB	LU632_RS21700	0.39	-2.2
4,150,847	-	fklB	LU632_RS21700	0.39	-0.2
4,150,966	+	fklB	LU632_RS21700	0.58	-1.5
4,150,966	+	fklB	LU632_RS21700	0.58	+1.8
4,151,183	-				-0.8
4,151,266	+				+0.3
4,151,388	+				-1.0
4,151,388	+				-0.9
4,151,390	+				-0.4
4,151,418	-				+0.4
4,151,555	+				+1.0
4,151,657	+		LU632_RS21705	0.24	+0.8
4,151,663	-		LU632_RS21705	0.25	-2.4
4,151,747	-		LU632_RS21705	0.40	-1.8
4,151,795	-		LU632_RS21705	0.48	-0.8
4,151,869	+		LU632_RS21705	0.62	-0.6
4,151,869	+		LU632_RS21705	0.62	-1.1
4,151,870	-		LU632_RS21705	0.62	+2.8
4,152,159	+				+0.1
4,152,159	+				-0.2
4,152,159	+				+1.1
4,152,160	-				-0.0
4,152,173	+				-0.3
4,152,189	+				-1.9
4,152,211	+				-0.2