Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS21645
Experiment: Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1) |
|---|---|---|---|---|---|
| remove | |||||
| 4,138,026 | + | fucO | LU632_RS21635 | 0.71 | +1.0 |
| 4,138,027 | - | fucO | LU632_RS21635 | 0.71 | +0.2 |
| 4,138,027 | - | fucO | LU632_RS21635 | 0.71 | -1.5 |
| 4,138,027 | - | fucO | LU632_RS21635 | 0.71 | -1.8 |
| 4,138,029 | + | fucO | LU632_RS21635 | 0.72 | +0.5 |
| 4,138,108 | - | fucO | LU632_RS21635 | 0.78 | -1.5 |
| 4,138,437 | + | +0.4 |
Or see this region's nucleotide sequence