Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS19800

Experiment: Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1)
3,760,165	+		LU632_RS19790	0.31	-0.9
3,760,198	+		LU632_RS19790	0.37	-1.0
3,760,198	+		LU632_RS19790	0.37	+3.7
3,760,217	-		LU632_RS19790	0.40	+1.9
3,760,324	+		LU632_RS19790	0.58	+0.1
3,760,324	+		LU632_RS19790	0.58	+1.0
3,760,324	+		LU632_RS19790	0.58	-0.1
3,760,324	+		LU632_RS19790	0.58	+2.5
3,760,324	+		LU632_RS19790	0.58	+0.7
3,760,325	-		LU632_RS19790	0.59	+0.2
3,760,396	+		LU632_RS19790	0.71	+0.4
3,760,396	+		LU632_RS19790	0.71	-1.7
3,760,397	-		LU632_RS19790	0.71	-1.7
3,760,397	-		LU632_RS19790	0.71	-0.3
3,760,427	-		LU632_RS19790	0.76	-0.3
3,760,526	-				-2.2
3,760,526	-				-0.0
3,760,526	-				-0.3
3,760,539	-				+0.7
3,760,584	-				+0.9