Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS16830

Experiment: Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1)
3,169,610	+	proW	LU632_RS16825	0.22	-1.1
3,169,610	+	proW	LU632_RS16825	0.22	+1.7
3,169,614	-	proW	LU632_RS16825	0.22	+0.2
3,169,631	+	proW	LU632_RS16825	0.23	-0.0
3,169,731	+	proW	LU632_RS16825	0.32	-0.2
3,169,731	+	proW	LU632_RS16825	0.32	+1.2
3,169,731	+	proW	LU632_RS16825	0.32	+2.2
3,169,731	+	proW	LU632_RS16825	0.32	-0.2
3,169,732	-	proW	LU632_RS16825	0.32	-1.7
3,169,732	-	proW	LU632_RS16825	0.32	+0.5
3,169,804	+	proW	LU632_RS16825	0.38	-1.7
3,169,991	+	proW	LU632_RS16825	0.54	-0.8
3,169,991	+	proW	LU632_RS16825	0.54	-1.1
3,169,991	+	proW	LU632_RS16825	0.54	-0.2
3,169,991	+	proW	LU632_RS16825	0.54	+0.5
3,169,991	+	proW	LU632_RS16825	0.54	-0.3
3,169,992	-	proW	LU632_RS16825	0.54	-3.4
3,169,992	-	proW	LU632_RS16825	0.54	-1.1
3,170,096	-	proW	LU632_RS16825	0.63	+1.9
3,170,102	+	proW	LU632_RS16825	0.64	-0.5
3,170,103	-	proW	LU632_RS16825	0.64	+0.7
3,170,103	-	proW	LU632_RS16825	0.64	+0.7
3,170,122	+	proW	LU632_RS16825	0.66	-0.4
3,170,122	+	proW	LU632_RS16825	0.66	+0.3
3,170,126	-	proW	LU632_RS16825	0.66	-0.5
3,170,126	-	proW	LU632_RS16825	0.66	-1.0
3,170,144	+	proW	LU632_RS16825	0.67	+2.2
3,170,148	-	proW	LU632_RS16825	0.68	-1.1
3,170,261	+	proW	LU632_RS16825	0.77	+0.1
3,170,399	+	proW	LU632_RS16825	0.89	+0.7
3,170,517	-				+0.5
3,170,527	-				+0.5
3,170,527	-				-0.6
3,170,597	+				-0.4
3,170,598	-				-0.4
3,170,644	-				-1.1
3,170,703	-	proX	LU632_RS16830	0.11	-1.8
3,170,790	+	proX	LU632_RS16830	0.20	-0.0
3,170,791	-	proX	LU632_RS16830	0.20	-0.6
3,170,791	-	proX	LU632_RS16830	0.20	-1.6
3,170,803	-	proX	LU632_RS16830	0.21	+1.6
3,170,871	+	proX	LU632_RS16830	0.28	-1.1
3,170,871	+	proX	LU632_RS16830	0.28	-0.5
3,170,871	+	proX	LU632_RS16830	0.28	+1.2
3,170,872	-	proX	LU632_RS16830	0.28	-0.8
3,170,872	-	proX	LU632_RS16830	0.28	-2.1
3,170,874	-	proX	LU632_RS16830	0.28	+0.2
3,170,912	+	proX	LU632_RS16830	0.32	-2.0
3,170,916	+	proX	LU632_RS16830	0.33	+0.1
3,170,916	+	proX	LU632_RS16830	0.33	-0.1
3,170,916	+	proX	LU632_RS16830	0.33	+0.2
3,170,916	+	proX	LU632_RS16830	0.33	-2.1
3,170,917	-	proX	LU632_RS16830	0.33	-0.8
3,170,951	+	proX	LU632_RS16830	0.36	+0.5
3,170,951	+	proX	LU632_RS16830	0.36	-0.3
3,171,062	+	proX	LU632_RS16830	0.47	+1.1
3,171,112	-	proX	LU632_RS16830	0.52	+0.7
3,171,151	-	proX	LU632_RS16830	0.56	+0.6
3,171,151	-	proX	LU632_RS16830	0.56	+2.5
3,171,151	-	proX	LU632_RS16830	0.56	-1.8
3,171,195	-	proX	LU632_RS16830	0.61	-0.1
3,171,195	-	proX	LU632_RS16830	0.61	-0.3
3,171,208	-	proX	LU632_RS16830	0.62	-1.5
3,171,212	+	proX	LU632_RS16830	0.62	-0.7
3,171,212	+	proX	LU632_RS16830	0.62	-0.9
3,171,212	+	proX	LU632_RS16830	0.62	+0.0
3,171,212	-	proX	LU632_RS16830	0.62	-1.5
3,171,213	-	proX	LU632_RS16830	0.62	-0.5
3,171,213	-	proX	LU632_RS16830	0.62	+1.0
3,171,213	-	proX	LU632_RS16830	0.62	+3.9
3,171,225	+	proX	LU632_RS16830	0.64	-0.5
3,171,290	+	proX	LU632_RS16830	0.70	+1.5
3,171,342	+	proX	LU632_RS16830	0.75	-1.1
3,171,359	+	proX	LU632_RS16830	0.77	-0.5
3,171,359	+	proX	LU632_RS16830	0.77	+0.5
3,171,368	+	proX	LU632_RS16830	0.78	+0.8
3,171,369	-	proX	LU632_RS16830	0.78	-1.7
3,171,500	+				+0.2
3,171,501	-				+0.5
3,171,501	-				-0.6
3,171,501	-				-0.0
3,171,501	-				+0.0
3,171,501	-				+0.1
3,171,636	+				-0.2
3,171,653	+				+0.5
3,171,713	+				-3.0
3,171,713	+				-3.0
3,171,805	-				-0.5
3,171,805	-				-2.7
3,171,809	-				+0.4
3,171,871	-				-1.2
3,172,011	+				-1.1
3,172,012	-				-1.1
3,172,101	-				-1.1
3,172,132	-				-0.4
3,172,132	-				-1.8
3,172,149	+				-0.8
3,172,150	-				-0.1
3,172,166	+				-0.5
3,172,210	+				-2.3
3,172,211	+				+1.0
3,172,216	+				-0.2
3,172,217	-				-0.1
3,172,217	-				-3.0
3,172,238	+				+0.6
3,172,239	-				+1.6
3,172,242	+				-1.1
3,172,242	+				-0.1
3,172,353	+				-0.5
3,172,353	+				+1.5
3,172,354	-				+0.9
3,172,381	+				+0.5
3,172,394	+				+1.5
3,172,394	+				+0.1
3,172,490	+	mprA	LU632_RS16835	0.15	+0.0