Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS14465

Experiment: Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1)
2,755,985	-		LU632_RS14455	0.78	-1.0
2,755,997	-		LU632_RS14455	0.79	-1.6
2,755,997	-		LU632_RS14455	0.79	-0.6
2,755,997	-		LU632_RS14455	0.79	-1.6
2,755,999	-		LU632_RS14455	0.79	-1.2
2,756,153	+				+1.4
2,756,154	-				+0.9
2,756,164	+				+0.7
2,756,165	-				-0.1
2,756,165	-				+0.3
2,756,166	+				-0.0
2,756,166	+				+0.4
2,756,166	+				+1.4
2,756,166	+				+3.8
2,756,167	-				-0.9
2,756,167	-				+0.6
2,756,369	+		LU632_RS14460	0.26	-0.6
2,756,407	+		LU632_RS14460	0.31	+0.5
2,756,408	+		LU632_RS14460	0.31	+0.1
2,756,452	+		LU632_RS14460	0.37	-0.3
2,756,452	+		LU632_RS14460	0.37	+1.8
2,756,494	+		LU632_RS14460	0.43	-0.8
2,757,207	+		LU632_RS14465	0.31	-2.9
2,757,288	+		LU632_RS14465	0.39	-0.4
2,757,364	+		LU632_RS14465	0.47	+0.4
2,757,467	+		LU632_RS14465	0.57	-0.0
2,757,521	+		LU632_RS14465	0.63	+4.1
2,757,535	+		LU632_RS14465	0.64	-1.3
2,757,535	+		LU632_RS14465	0.64	+0.2
2,757,796	-				-0.3
2,757,834	-				+1.2
2,757,863	+				+0.6
2,757,970	-		LU632_RS14470	0.47	-2.9
2,758,053	+				-2.2
2,758,127	+				+1.3
2,758,335	-		LU632_RS14475	0.38	-1.6
2,758,339	-		LU632_RS14475	0.38	+0.4
2,758,339	-		LU632_RS14475	0.38	-1.2
2,758,339	-		LU632_RS14475	0.38	-0.5
2,758,339	-		LU632_RS14475	0.38	-0.3
2,758,377	-		LU632_RS14475	0.43	-1.4
2,758,382	-		LU632_RS14475	0.44	-0.6
2,758,411	+		LU632_RS14475	0.48	+1.9
2,758,453	+		LU632_RS14475	0.54	+0.4
2,758,453	+		LU632_RS14475	0.54	-1.9
2,758,453	+		LU632_RS14475	0.54	-3.1
2,758,454	-		LU632_RS14475	0.54	-0.3
2,758,492	+		LU632_RS14475	0.60	+1.6
2,758,643	-		LU632_RS14475	0.81	+0.7
2,758,643	-		LU632_RS14475	0.81	-0.2
2,758,643	-		LU632_RS14475	0.81	+0.8
2,758,661	+		LU632_RS14475	0.83	+0.2
2,758,661	+		LU632_RS14475	0.83	+0.0
2,758,766	+				+0.1
2,758,833	+				-0.1