Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS13870

Experiment: Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1)
2,660,410	-		LU632_RS13860	0.88	-2.4
2,660,410	-		LU632_RS13860	0.88	-0.1
2,660,410	-		LU632_RS13860	0.88	+0.3
2,660,462	-				-1.9
2,660,548	+				-0.6
2,660,692	+		LU632_RS13865	0.25	-0.0
2,660,693	-		LU632_RS13865	0.25	+2.4
2,660,693	-		LU632_RS13865	0.25	+0.4
2,660,758	+		LU632_RS13865	0.43	-0.6
2,660,758	+		LU632_RS13865	0.43	-0.6
2,660,758	+		LU632_RS13865	0.43	+0.4
2,660,811	-		LU632_RS13865	0.58	+1.1
2,660,811	-		LU632_RS13865	0.58	-0.0
2,660,850	-		LU632_RS13865	0.69	-4.1
2,660,850	-		LU632_RS13865	0.69	-0.2
2,660,851	+		LU632_RS13865	0.69	-0.8
2,660,852	-		LU632_RS13865	0.70	-0.5
2,660,978	+				+1.2
2,660,979	-				+0.4
2,660,995	+				-0.2
2,660,998	+				+0.2
2,661,011	+				-1.1
2,661,012	-				-0.2
2,661,012	-				+0.7
2,661,012	-				+0.5
2,661,171	-		LU632_RS13870	0.35	-2.9
2,661,171	-		LU632_RS13870	0.35	-1.0
2,661,323	+		LU632_RS13870	0.68	-1.6
2,661,424	+		LU632_RS13870	0.90	-1.3
2,661,425	-				+0.6
2,661,433	-				+1.5
2,661,434	+				-1.2
2,661,435	+				-0.9
2,661,463	+				+0.2
2,661,660	-		LU632_RS13875	0.58	-0.8
2,661,897	-				-1.3
2,662,095	-				+0.8
2,662,305	+		LU632_RS13880	0.58	-1.1
2,662,305	+		LU632_RS13880	0.58	+0.0
2,662,305	+		LU632_RS13880	0.58	-2.6
2,662,394	+		LU632_RS13880	0.79	+1.6