Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS11480

Experiment: Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1)
2,190,901	+		LU632_RS11475	0.15	-0.5
2,190,941	-		LU632_RS11475	0.19	-0.6
2,190,967	+		LU632_RS11475	0.23	+0.4
2,191,101	-		LU632_RS11475	0.39	+1.1
2,191,177	+		LU632_RS11475	0.48	+0.0
2,191,222	-		LU632_RS11475	0.54	-1.4
2,191,240	+		LU632_RS11475	0.56	-2.2
2,191,363	+		LU632_RS11475	0.71	+1.9
2,191,372	+		LU632_RS11475	0.72	-2.6
2,191,479	+		LU632_RS11475	0.85	+3.1
2,191,479	+		LU632_RS11475	0.85	-0.4
2,191,520	+				-0.3
2,191,624	+				+0.6
2,191,663	+				-0.4
2,191,663	+				-3.3
2,191,663	+				+0.3
2,191,664	-				-0.9
2,191,667	-				-3.4
2,191,675	+				-0.4
2,191,689	+				+2.0
2,191,701	+				-2.5
2,191,701	+				+0.3
2,191,702	-				-0.6
2,191,702	-				+1.9
2,191,702	-				+0.5
2,191,746	-				-0.1
2,191,746	-				-0.9
2,191,768	-				-1.2
2,191,900	+		LU632_RS11480	0.16	-0.9
2,191,910	+		LU632_RS11480	0.22	-0.2
2,192,003	+		LU632_RS11480	0.81	-0.3
2,192,003	+		LU632_RS11480	0.81	-0.7
2,192,003	+		LU632_RS11480	0.81	+0.5
2,192,120	-				-0.0
2,192,434	+		LU632_RS11485	0.73	-1.5