Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS11440

Experiment: Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1)
2,182,713	-	pntA	LU632_RS11435	0.51	-0.7
2,183,099	-	pntA	LU632_RS11435	0.77	+0.9
2,183,157	-	pntA	LU632_RS11435	0.80	-2.1
2,183,189	-	pntA	LU632_RS11435	0.82	+0.5
2,183,189	-	pntA	LU632_RS11435	0.82	+1.0
2,183,254	+	pntA	LU632_RS11435	0.87	+0.3
2,183,271	-	pntA	LU632_RS11435	0.88	-1.9
2,183,311	-				-1.3
2,183,454	-				-1.7
2,183,458	+				+0.6
2,183,627	-				-0.5
2,183,695	+				-1.2
2,184,487	+				+0.6
2,184,624	+				+0.0
2,184,627	+				-1.0
2,184,638	+				+2.0
2,184,686	+				-0.6
2,184,819	+				+0.3
2,184,819	+				+0.8
2,184,820	-				+2.1
2,184,820	-				-1.3
2,184,838	-				+1.3
2,184,979	+	ydgH	LU632_RS11445	0.21	-1.4
2,184,979	+	ydgH	LU632_RS11445	0.21	+0.4
2,184,979	+	ydgH	LU632_RS11445	0.21	+2.2
2,184,979	+	ydgH	LU632_RS11445	0.21	+0.6
2,184,979	+	ydgH	LU632_RS11445	0.21	+0.5
2,184,980	-	ydgH	LU632_RS11445	0.21	-1.3
2,184,999	+	ydgH	LU632_RS11445	0.23	-1.3
2,185,047	+	ydgH	LU632_RS11445	0.29	-2.2
2,185,201	-	ydgH	LU632_RS11445	0.45	-0.6
2,185,236	+	ydgH	LU632_RS11445	0.48	-0.0
2,185,279	+	ydgH	LU632_RS11445	0.53	+0.9
2,185,280	-	ydgH	LU632_RS11445	0.53	+1.0
2,185,280	-	ydgH	LU632_RS11445	0.53	-2.1
2,185,280	-	ydgH	LU632_RS11445	0.53	-1.5
2,185,291	+	ydgH	LU632_RS11445	0.54	-0.7
2,185,295	+	ydgH	LU632_RS11445	0.55	-0.2
2,185,295	+	ydgH	LU632_RS11445	0.55	-1.7
2,185,295	+	ydgH	LU632_RS11445	0.55	-0.2
2,185,295	+	ydgH	LU632_RS11445	0.55	+1.9
2,185,295	+	ydgH	LU632_RS11445	0.55	-2.3
2,185,295	+	ydgH	LU632_RS11445	0.55	-0.0
2,185,296	-	ydgH	LU632_RS11445	0.55	+1.7