Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS11345

Experiment: Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1)
2,166,428	+				-1.7
2,166,437	+				+0.4
2,166,492	-				+0.1
2,166,492	-				-2.0
2,166,538	+				-2.3
2,166,538	+				+0.4
2,166,544	-				-1.4
2,166,561	+				-0.1
2,166,561	+				+0.2
2,166,562	-				+2.1
2,166,577	+				-0.7
2,166,578	-				-0.0
2,166,578	-				-0.4
2,166,588	+				+0.7
2,167,073	-				-1.2
2,167,216	-				+0.0
2,167,280	-				+1.3
2,167,306	+				-0.5
2,167,306	+				+0.0
2,167,307	-				-0.1
2,167,307	-				+2.3
2,167,345	-				+2.1
2,167,957	+		LU632_RS11345	0.85	-2.7
2,168,092	+				-1.3
2,168,095	+				+4.2
2,168,096	-				+1.7
2,168,160	+		LU632_RS11350	0.11	+0.9
2,168,160	+		LU632_RS11350	0.11	-1.2
2,168,215	+		LU632_RS11350	0.16	-0.6
2,168,256	-		LU632_RS11350	0.20	-0.2
2,168,256	-		LU632_RS11350	0.20	-0.3
2,168,256	-		LU632_RS11350	0.20	+0.4
2,168,289	+		LU632_RS11350	0.24	+1.2
2,168,292	+		LU632_RS11350	0.24	+2.0
2,168,295	+		LU632_RS11350	0.24	-0.6
2,168,324	+		LU632_RS11350	0.27	+0.7
2,168,400	+		LU632_RS11350	0.34	+0.9
2,168,439	+		LU632_RS11350	0.38	-0.2
2,168,448	+		LU632_RS11350	0.39	-1.4
2,168,535	-		LU632_RS11350	0.48	+0.8
2,168,535	-		LU632_RS11350	0.48	+1.0
2,168,591	+		LU632_RS11350	0.53	+1.2
2,168,597	+		LU632_RS11350	0.54	+0.5
2,168,597	+		LU632_RS11350	0.54	-3.0
2,168,683	-		LU632_RS11350	0.62	-0.4
2,168,708	-		LU632_RS11350	0.65	+1.9
2,168,858	+		LU632_RS11350	0.79	-0.7
2,168,859	-		LU632_RS11350	0.79	-0.2