Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS11250

Experiment: Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1)
2,150,308	+	slyB	LU632_RS11245	0.21	-1.7
2,150,310	+	slyB	LU632_RS11245	0.21	+0.3
2,150,311	-	slyB	LU632_RS11245	0.21	-1.0
2,150,311	-	slyB	LU632_RS11245	0.21	-0.0
2,150,375	-	slyB	LU632_RS11245	0.35	-1.7
2,150,451	+	slyB	LU632_RS11245	0.51	-0.8
2,150,551	-	slyB	LU632_RS11245	0.72	-1.7
2,150,556	-	slyB	LU632_RS11245	0.74	-0.7
2,150,595	-	slyB	LU632_RS11245	0.82	+0.3
2,150,656	+				-1.3
2,150,656	+				+0.3
2,150,668	-				+0.3
2,150,741	+				+0.3
2,150,741	+				-0.3
2,150,802	+				-0.3
2,150,838	+				-0.7
2,150,932	-				+0.3
2,150,985	-				+0.3
2,151,119	-	anmK	LU632_RS11250	0.14	-0.7
2,151,205	+	anmK	LU632_RS11250	0.21	+0.3
2,151,206	-	anmK	LU632_RS11250	0.21	+0.1
2,151,247	+	anmK	LU632_RS11250	0.25	+1.9
2,151,247	+	anmK	LU632_RS11250	0.25	+0.5
2,151,248	-	anmK	LU632_RS11250	0.25	+1.9
2,151,299	+	anmK	LU632_RS11250	0.30	+3.9
2,151,433	+	anmK	LU632_RS11250	0.42	-1.7
2,151,434	-	anmK	LU632_RS11250	0.42	+0.2
2,151,493	+	anmK	LU632_RS11250	0.47	+1.0
2,151,494	-	anmK	LU632_RS11250	0.47	+0.8
2,151,523	-	anmK	LU632_RS11250	0.50	-1.1
2,151,542	+	anmK	LU632_RS11250	0.51	+0.9
2,151,542	+	anmK	LU632_RS11250	0.51	-1.8
2,151,542	+	anmK	LU632_RS11250	0.51	+2.8
2,151,543	-	anmK	LU632_RS11250	0.51	+2.9
2,151,543	-	anmK	LU632_RS11250	0.51	+0.7
2,151,543	-	anmK	LU632_RS11250	0.51	+0.8
2,151,543	-	anmK	LU632_RS11250	0.51	-1.5
2,151,543	-	anmK	LU632_RS11250	0.51	-1.5
2,151,571	-	anmK	LU632_RS11250	0.54	-0.7
2,151,572	+	anmK	LU632_RS11250	0.54	+0.8
2,151,585	+	anmK	LU632_RS11250	0.55	-1.7
2,151,585	+	anmK	LU632_RS11250	0.55	+1.5
2,151,622	+	anmK	LU632_RS11250	0.58	+2.4
2,151,622	+	anmK	LU632_RS11250	0.58	+1.9
2,151,623	-	anmK	LU632_RS11250	0.58	+1.5
2,151,693	-	anmK	LU632_RS11250	0.65	+0.7
2,151,700	-	anmK	LU632_RS11250	0.65	-1.0
2,151,785	+	anmK	LU632_RS11250	0.73	-1.7
2,151,818	-	anmK	LU632_RS11250	0.76	+1.3
2,151,937	+	anmK	LU632_RS11250	0.86	-0.7
2,151,938	-	anmK	LU632_RS11250	0.87	-0.0
2,152,008	-				-0.7
2,152,060	-				+1.4
2,152,094	+				+1.5
2,152,094	+				+1.1
2,152,194	+				-2.0
2,152,195	-				-1.7
2,152,202	-				+0.0
2,152,205	-				+1.7
2,152,324	+				+0.3
2,152,324	+				-1.7
2,152,324	+				-0.5
2,152,324	+				-0.2
2,152,325	-				-0.4
2,152,329	-				-2.3