Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS10460

Experiment: Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1)
2,000,522	-		LU632_RS10455	0.73	+0.9
2,000,582	+		LU632_RS10455	0.76	+0.1
2,000,646	+		LU632_RS10455	0.78	+2.8
2,000,646	+		LU632_RS10455	0.78	-2.8
2,000,647	-		LU632_RS10455	0.78	-1.0
2,000,647	-		LU632_RS10455	0.78	+1.6
2,001,047	+				-0.0
2,001,047	+				+0.4
2,001,047	+				-1.6
2,001,047	+				+1.0
2,001,048	-				-0.6
2,001,048	-				+0.3
2,001,048	-				+0.7
2,001,048	-				+3.2
2,001,048	-				+1.1
2,001,048	-				+1.0
2,001,106	+				+0.2
2,001,107	-				-0.7
2,001,216	-				-2.2
2,001,926	+		LU632_RS10465	0.28	-1.4
2,001,927	-		LU632_RS10465	0.28	-1.2
2,002,051	-		LU632_RS10465	0.56	+1.2
2,002,111	+		LU632_RS10465	0.70	-1.4
2,002,140	-		LU632_RS10465	0.77	-0.4
2,002,588	+				+0.1