Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS10145

Experiment: Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1)
1,939,364	-	wrbA	LU632_RS10140	0.24	+0.4
1,939,364	-	wrbA	LU632_RS10140	0.24	+0.3
1,939,504	-	wrbA	LU632_RS10140	0.48	-0.6
1,939,608	+	wrbA	LU632_RS10140	0.65	+0.4
1,939,716	-	wrbA	LU632_RS10140	0.83	+1.2
1,939,837	-				-2.4
1,939,860	-				-0.2
1,939,860	-				+0.1
1,939,897	-				-0.2
1,939,955	+				-0.9
1,939,956	-				-1.9
1,939,956	-				+0.2
1,939,957	+				+0.9
1,939,957	+				-0.0
1,939,957	+				+0.0
1,939,973	+				+1.1
1,939,985	-				-0.5
1,939,985	-				+1.7
1,940,002	+				+1.1
1,940,002	+				+0.7
1,940,151	-				+0.9
1,940,180	-				-1.0
1,940,214	+				-2.9
1,940,299	+				-0.1
1,940,300	-				+0.0
1,940,303	+				-1.3
1,940,375	-				+0.2
1,940,473	+		LU632_RS10145	0.24	-0.8
1,940,474	-		LU632_RS10145	0.24	+1.2
1,940,540	+		LU632_RS10145	0.33	-0.1
1,940,540	+		LU632_RS10145	0.33	+1.3
1,940,591	-		LU632_RS10145	0.41	-0.5
1,940,591	-		LU632_RS10145	0.41	+0.4
1,940,622	+		LU632_RS10145	0.45	+0.8
1,940,622	+		LU632_RS10145	0.45	+1.2
1,940,622	+		LU632_RS10145	0.45	-1.2
1,940,623	-		LU632_RS10145	0.45	-0.4
1,940,623	-		LU632_RS10145	0.45	-1.2
1,940,625	-		LU632_RS10145	0.46	+0.1
1,940,625	-		LU632_RS10145	0.46	+0.8
1,940,775	-		LU632_RS10145	0.68	+2.2
1,940,775	-		LU632_RS10145	0.68	-3.4
1,940,916	-		LU632_RS10145	0.88	-1.5
1,940,921	-		LU632_RS10145	0.89	+1.2
1,941,069	-				-1.4
1,941,102	-				-1.6
1,941,102	-				+0.7
1,941,150	+	rutA	LU632_RS10150	0.10	+1.2
1,941,151	+	rutA	LU632_RS10150	0.10	-0.8
1,941,234	-	rutA	LU632_RS10150	0.18	+0.5
1,941,234	-	rutA	LU632_RS10150	0.18	+1.9
1,941,237	-	rutA	LU632_RS10150	0.18	+0.6
1,941,237	-	rutA	LU632_RS10150	0.18	-0.8
1,941,237	-	rutA	LU632_RS10150	0.18	+0.1
1,941,240	-	rutA	LU632_RS10150	0.18	-2.2
1,941,356	+	rutA	LU632_RS10150	0.29	+0.2
1,941,358	+	rutA	LU632_RS10150	0.29	-1.9
1,941,359	-	rutA	LU632_RS10150	0.29	-1.8
1,941,359	-	rutA	LU632_RS10150	0.29	+1.6
1,941,372	-	rutA	LU632_RS10150	0.30	+1.0
1,941,405	-	rutA	LU632_RS10150	0.33	-1.9
1,941,421	+	rutA	LU632_RS10150	0.35	+0.9
1,941,422	-	rutA	LU632_RS10150	0.35	+0.8
1,941,476	+	rutA	LU632_RS10150	0.40	+0.7
1,941,504	-	rutA	LU632_RS10150	0.42	+1.4
1,941,526	+	rutA	LU632_RS10150	0.44	-2.8
1,941,648	+	rutA	LU632_RS10150	0.56	-0.4
1,941,648	+	rutA	LU632_RS10150	0.56	+0.4
1,941,695	-	rutA	LU632_RS10150	0.60	+0.6
1,941,760	+	rutA	LU632_RS10150	0.66	-0.2
1,941,816	-	rutA	LU632_RS10150	0.71	-2.1
1,941,883	+	rutA	LU632_RS10150	0.77	+0.7
1,941,883	+	rutA	LU632_RS10150	0.77	-0.2
1,941,883	+	rutA	LU632_RS10150	0.77	-0.6
1,941,884	-	rutA	LU632_RS10150	0.77	-2.5
1,941,884	-	rutA	LU632_RS10150	0.77	-1.2