Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS09200

Experiment: Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1)
1,731,376	+				+0.2
1,731,376	+				-0.9
1,731,376	+				-2.6
1,731,377	-				-1.0
1,731,539	+	moaE	LU632_RS09195	0.29	-1.1
1,731,830	+				+0.3
1,731,830	+				-0.5
1,732,059	+				+1.4
1,732,156	-				-1.1
1,732,171	+				-1.1
1,732,172	-				-0.1
1,732,186	+				-0.4
1,732,502	+		LU632_RS09200	0.35	-0.5
1,732,503	-		LU632_RS09200	0.35	-0.3
1,732,503	-		LU632_RS09200	0.35	-0.5
1,732,571	-		LU632_RS09200	0.42	+0.1
1,732,572	+		LU632_RS09200	0.42	+0.5
1,732,572	+		LU632_RS09200	0.42	+0.3
1,732,572	+		LU632_RS09200	0.42	+0.8
1,732,572	+		LU632_RS09200	0.42	-0.4
1,732,573	-		LU632_RS09200	0.42	-0.3
1,732,711	-		LU632_RS09200	0.54	-0.3
1,732,711	-		LU632_RS09200	0.54	-1.5
1,732,817	+		LU632_RS09200	0.64	+0.2
1,732,817	+		LU632_RS09200	0.64	+1.3
1,732,871	-		LU632_RS09200	0.68	+0.9
1,732,897	-		LU632_RS09200	0.71	+0.1
1,732,897	-		LU632_RS09200	0.71	+0.5
1,732,901	+		LU632_RS09200	0.71	-1.1
1,733,059	+		LU632_RS09200	0.85	+1.2
1,733,060	-		LU632_RS09200	0.85	-3.2
1,733,060	-		LU632_RS09200	0.85	-2.4
1,733,403	+				-0.3
1,733,404	-				+0.8
1,733,423	+				+4.7
1,733,457	+				+0.5
1,733,457	+				+0.8
1,733,457	+				-1.1
1,733,457	+				+0.3
1,733,457	+				+0.1
1,733,458	-				+0.1
1,733,458	-				+1.2
1,733,458	-				-1.1
1,733,458	-				-1.1
1,733,498	-		LU632_RS09205	0.15	+0.1
1,733,589	-		LU632_RS09205	0.27	-1.1
1,733,673	+		LU632_RS09205	0.39	+1.1
1,733,674	-		LU632_RS09205	0.39	+0.1
1,733,674	-		LU632_RS09205	0.39	-0.7
1,733,718	+		LU632_RS09205	0.46	+0.9
1,733,719	-		LU632_RS09205	0.46	-1.3
1,733,721	-		LU632_RS09205	0.46	+1.5
1,733,790	+		LU632_RS09205	0.56	+1.1
1,733,830	+		LU632_RS09205	0.61	+1.5
1,733,834	+		LU632_RS09205	0.62	+0.3
1,733,834	+		LU632_RS09205	0.62	-0.1
1,733,835	-		LU632_RS09205	0.62	+0.9
1,733,835	-		LU632_RS09205	0.62	+1.0
1,733,873	+		LU632_RS09205	0.67	+0.3
1,733,874	-		LU632_RS09205	0.68	-2.3
1,733,913	+		LU632_RS09205	0.73	-0.3
1,733,913	+		LU632_RS09205	0.73	+0.7
1,733,913	+		LU632_RS09205	0.73	+0.6
1,733,913	+		LU632_RS09205	0.73	-3.1
1,733,914	-		LU632_RS09205	0.73	+1.5
1,733,914	-		LU632_RS09205	0.73	+0.9
1,733,916	-		LU632_RS09205	0.73	+1.5
1,734,215	+				-0.2