Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS06030

Experiment: Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1)
1,143,299	+		LU632_RS06025	0.25	+1.6
1,143,299	+		LU632_RS06025	0.25	-1.6
1,143,299	+		LU632_RS06025	0.25	+0.0
1,143,299	+		LU632_RS06025	0.25	+0.8
1,143,299	+		LU632_RS06025	0.25	-0.3
1,143,299	+		LU632_RS06025	0.25	+1.0
1,143,299	+		LU632_RS06025	0.25	+0.6
1,143,300	-		LU632_RS06025	0.25	-0.8
1,143,300	-		LU632_RS06025	0.25	-2.0
1,143,367	-		LU632_RS06025	0.36	+0.7
1,143,444	-		LU632_RS06025	0.48	-1.7
1,143,449	+		LU632_RS06025	0.49	+0.0
1,143,449	+		LU632_RS06025	0.49	+1.4
1,143,449	+		LU632_RS06025	0.49	+1.3
1,143,449	+		LU632_RS06025	0.49	-0.6
1,143,453	+		LU632_RS06025	0.49	-0.5
1,143,454	-		LU632_RS06025	0.50	+0.2
1,143,454	-		LU632_RS06025	0.50	+4.4
1,143,518	+		LU632_RS06025	0.60	+0.0
1,143,518	+		LU632_RS06025	0.60	+0.4
1,143,518	+		LU632_RS06025	0.60	+2.9
1,143,518	+		LU632_RS06025	0.60	-1.7
1,143,518	+		LU632_RS06025	0.60	-1.7
1,143,518	+		LU632_RS06025	0.60	+0.4
1,143,518	+		LU632_RS06025	0.60	+0.5
1,143,519	-		LU632_RS06025	0.60	+1.5
1,143,655	-		LU632_RS06025	0.82	-0.3
1,143,675	+		LU632_RS06025	0.85	-1.2
1,143,676	-		LU632_RS06025	0.85	-1.0
1,143,711	-				+0.3
1,143,711	-				-1.6
1,143,790	-				-2.7
1,143,890	+				-0.4
1,143,900	+				+0.1
1,143,901	-				-0.6
1,143,935	+				+2.1
1,143,935	+				+2.2
1,144,019	-				-1.7
1,144,092	+				+0.3
1,144,102	+				+2.6
1,144,103	-				+0.3
1,144,103	-				-0.6
1,144,220	-				-1.4
1,144,401	+				-2.2
1,144,618	+		LU632_RS06030	0.30	+0.5
1,144,677	+		LU632_RS06030	0.35	+0.6
1,144,677	+		LU632_RS06030	0.35	+0.6
1,144,677	+		LU632_RS06030	0.35	-0.4
1,144,743	+		LU632_RS06030	0.41	+2.4
1,144,743	+		LU632_RS06030	0.41	-0.8
1,144,747	+		LU632_RS06030	0.42	+0.6
1,144,747	+		LU632_RS06030	0.42	-0.5
1,144,747	+		LU632_RS06030	0.42	-0.6
1,144,821	+		LU632_RS06030	0.49	-1.7
1,144,837	+		LU632_RS06030	0.50	+0.2
1,144,837	+		LU632_RS06030	0.50	+0.5
1,144,871	+		LU632_RS06030	0.53	+0.5
1,144,871	+		LU632_RS06030	0.53	+0.7
1,144,871	+		LU632_RS06030	0.53	-2.6
1,144,871	+		LU632_RS06030	0.53	+0.0
1,144,872	-		LU632_RS06030	0.53	+1.0
1,144,872	-		LU632_RS06030	0.53	+0.6
1,144,873	+		LU632_RS06030	0.53	+0.2
1,144,873	+		LU632_RS06030	0.53	+2.4
1,144,966	+		LU632_RS06030	0.62	-0.2
1,144,966	+		LU632_RS06030	0.62	-0.8
1,144,966	+		LU632_RS06030	0.62	+0.6
1,144,967	-		LU632_RS06030	0.62	-0.2
1,145,137	-		LU632_RS06030	0.78	-0.3
1,145,255	-		LU632_RS06030	0.89	+0.6
1,145,262	-		LU632_RS06030	0.89	+1.2
1,145,313	+				+0.6
1,145,313	+				+2.3
1,145,314	-				+0.6
1,145,372	+				-1.4
1,145,412	+				-1.4
1,145,412	+				-1.3
1,145,490	+		LU632_RS06035	0.13	-0.1
1,145,574	+		LU632_RS06035	0.22	-2.2
1,145,711	+		LU632_RS06035	0.37	-2.0
1,145,712	-		LU632_RS06035	0.37	+2.3
1,145,910	+		LU632_RS06035	0.59	-0.6
1,145,911	-		LU632_RS06035	0.59	-0.0
1,145,913	+		LU632_RS06035	0.59	-1.0
1,145,914	-		LU632_RS06035	0.59	-2.0
1,146,097	+		LU632_RS06035	0.79	+1.0
1,146,268	-				+0.7
1,146,333	-				-1.2
1,146,333	-				+0.8