Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS03895

Experiment: Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1)
778,552	+				+0.3
778,567	+				+0.5
778,568	-				-0.2
778,568	-				-0.1
778,782	-		LU632_RS03890	0.85	-1.4
779,099	-				+5.3
779,185	-				+1.0
779,185	-				-0.4
779,425	-				+1.1
779,446	+				-0.3
779,455	+				-3.0
779,492	+				-2.8
779,492	+				+2.7
779,492	+				-0.9
779,493	-				+0.6
779,685	+		LU632_RS03895	0.27	-0.7
779,688	-		LU632_RS03895	0.27	-1.5
779,715	+		LU632_RS03895	0.30	-0.6
779,717	+		LU632_RS03895	0.31	+0.5
779,891	-		LU632_RS03895	0.53	-0.3
779,984	+		LU632_RS03895	0.65	-2.1
780,067	+		LU632_RS03895	0.76	-0.6
780,161	+		LU632_RS03895	0.89	-0.4
780,162	-		LU632_RS03895	0.89	+1.3
780,171	+		LU632_RS03895	0.90	-0.1
780,172	-				+2.0
780,251	+				-0.7
780,251	+				-1.3
780,252	-				+0.7
780,259	-				+0.9
780,275	+				-1.0
780,313	-				+0.5
780,313	-				-0.1
780,502	-				-0.4
780,507	-				-0.3
780,890	-				+1.1
780,923	+				+0.7
780,967	+				+0.0
780,967	+				-0.4
780,968	-				+1.9
781,050	-				-0.4
781,050	-				-2.3
781,239	+				-2.0