Strain Fitness in Erwinia amylovora T8 around OLJFJH_17890

Experiment: Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-9

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-9
3,755,992	-				+1.3
3,756,000	-				-0.6
3,756,083	+				+0.7
3,756,084	-				+0.6
3,756,162	+		OLJFJH_17875	0.17	+0.9
3,756,316	+		OLJFJH_17875	0.56	-0.6
3,756,366	+		OLJFJH_17875	0.69	-0.2
3,756,366	+		OLJFJH_17875	0.69	-1.5
3,756,388	+		OLJFJH_17875	0.74	-0.4
3,756,389	-		OLJFJH_17875	0.75	-0.5
3,756,611	+		OLJFJH_17880	0.47	-0.2
3,756,611	+		OLJFJH_17880	0.47	-1.5
3,756,678	+		OLJFJH_17880	0.78	-0.4
3,756,695	+		OLJFJH_17880	0.85	-1.5
3,756,733	-				-0.4
3,756,754	+				-0.6
3,756,754	+				+0.1
3,756,963	+				-0.1
3,756,963	+				-0.1
3,756,963	+				-3.7
3,756,964	-				+0.3
3,757,005	+		OLJFJH_17890	0.16	-0.4
3,757,005	+		OLJFJH_17890	0.16	-0.4
3,757,006	-		OLJFJH_17890	0.17	+0.5
3,757,006	-		OLJFJH_17890	0.17	-0.4
3,757,104	+		OLJFJH_17890	0.41	-0.2
3,757,104	+		OLJFJH_17890	0.41	-0.9
3,757,104	+		OLJFJH_17890	0.41	+0.2
3,757,104	+		OLJFJH_17890	0.41	-2.0
3,757,105	-		OLJFJH_17890	0.41	-1.6
3,757,211	-		OLJFJH_17890	0.67	-0.4
3,757,211	-		OLJFJH_17890	0.67	+0.3
3,757,404	+				+0.4
3,757,413	+				-0.0
3,757,413	+				-0.5
3,757,429	+		OLJFJH_17895	0.11	+1.4
3,757,429	+		OLJFJH_17895	0.11	+0.6
3,757,543	-		OLJFJH_17895	0.32	+0.6
3,757,543	-		OLJFJH_17895	0.32	-0.4
3,757,562	-		OLJFJH_17895	0.35	+0.3
3,757,562	-		OLJFJH_17895	0.35	-0.5
3,757,687	-		OLJFJH_17895	0.58	+0.6
3,757,836	+		OLJFJH_17895	0.84	+0.1
3,757,836	+		OLJFJH_17895	0.84	-0.4
3,757,837	-		OLJFJH_17895	0.84	+0.2
3,757,837	-		OLJFJH_17895	0.84	+0.1
3,757,861	-		OLJFJH_17895	0.89	-1.3
3,757,904	-				+0.4
3,757,904	-				-0.7
3,757,906	+				-0.0
3,757,906	+				-0.2
3,757,907	-				+0.5
3,757,952	-				-0.0
3,757,989	-				+2.2
3,758,034	+				-0.6
3,758,035	-				+0.0
3,758,043	-				-0.6
3,758,076	+				+0.1
3,758,132	+				-0.8
3,758,133	-				+0.1
3,758,165	+				-2.0
3,758,165	+				+0.5
3,758,280	+		OLJFJH_17900	0.15	-0.4