Strain Fitness in Erwinia amylovora T8 around OLJFJH_17390

Experiment: Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-9

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-9
3,671,264	+				+0.2
3,671,287	-				+0.7
3,671,360	-				+0.1
3,671,410	-				-0.8
3,671,473	-				+0.1
3,671,474	+				+0.1
3,671,474	+				-1.2
3,671,474	+				+1.3
3,671,560	+		OLJFJH_17385	0.14	+0.5
3,671,561	-		OLJFJH_17385	0.14	-0.8
3,671,561	-		OLJFJH_17385	0.14	-1.5
3,671,570	-		OLJFJH_17385	0.17	+0.3
3,671,570	-		OLJFJH_17385	0.17	+0.4
3,671,686	+		OLJFJH_17385	0.47	-0.4
3,671,686	+		OLJFJH_17385	0.47	-0.2
3,671,687	-		OLJFJH_17385	0.48	+0.9
3,671,687	-		OLJFJH_17385	0.48	-0.4
3,671,769	+		OLJFJH_17385	0.70	+0.0
3,671,769	+		OLJFJH_17385	0.70	-2.0
3,671,770	-		OLJFJH_17385	0.70	+0.0
3,671,813	+		OLJFJH_17385	0.81	+0.4
3,671,813	+		OLJFJH_17385	0.81	-0.1
3,671,814	-		OLJFJH_17385	0.82	-0.1
3,671,814	-		OLJFJH_17385	0.82	+1.0
3,671,814	-		OLJFJH_17385	0.82	-0.4
3,671,840	+		OLJFJH_17385	0.89	-0.3
3,671,841	-		OLJFJH_17385	0.89	-0.2
3,671,946	-				-1.2
3,672,076	+				+1.1
3,672,077	-				+0.2
3,672,150	-				-0.4
3,672,430	-		OLJFJH_17390	0.19	+0.0
3,672,596	+		OLJFJH_17390	0.30	-0.3
3,672,846	-		OLJFJH_17390	0.47	+1.7
3,672,972	+		OLJFJH_17390	0.56	+0.3
3,673,208	+		OLJFJH_17390	0.72	+2.2
3,673,210	+		OLJFJH_17390	0.72	+0.3
3,673,218	-		OLJFJH_17390	0.73	-0.0
3,673,753	+				+0.2
3,673,755	+				-0.5
3,673,822	+				-0.8
3,674,006	+				-0.9
3,674,006	+				-0.4
3,674,006	+				-0.3
3,674,059	+				-0.5
3,674,111	+				-0.4
3,674,150	-				+0.2
3,674,150	-				+0.1
3,674,270	+				-0.8
3,674,271	-				+1.8
3,674,271	-				-0.1
3,674,335	+				-0.1
3,674,336	-				+0.5
3,674,475	+		OLJFJH_17395	0.18	-0.7
3,674,475	+		OLJFJH_17395	0.18	+0.2
3,674,476	-		OLJFJH_17395	0.18	+0.3
3,674,476	-		OLJFJH_17395	0.18	+0.4
3,674,494	+		OLJFJH_17395	0.19	-0.4
3,674,494	+		OLJFJH_17395	0.19	-0.1
3,674,495	-		OLJFJH_17395	0.19	+2.5
3,674,495	-		OLJFJH_17395	0.19	+0.6
3,674,608	+		OLJFJH_17395	0.26	-1.5