Strain Fitness in Erwinia amylovora T8 around OLJFJH_12020

Experiment: Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-9

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-9
2,526,692	+		OLJFJH_12015	0.89	+0.0
2,526,861	-				-0.2
2,526,886	-				-0.2
2,526,991	-				+0.3
2,527,027	-				-0.4
2,527,027	-				+0.7
2,527,058	-				-0.3
2,527,070	+				+0.4
2,527,148	-				+1.1
2,527,230	+				+1.4
2,527,230	+				+0.8
2,527,230	+				+1.7
2,527,236	+				+2.1
2,527,239	+				+0.5
2,527,240	-				+0.6
2,527,242	-				+0.2
2,527,276	+				+0.9
2,527,338	+				+1.0
2,527,374	-				+1.9
2,527,376	-				+2.0
2,527,413	+				+0.5
2,527,414	-				+1.5
2,527,463	+				+0.5
2,527,463	+				+0.3
2,527,493	-				+0.3
2,527,493	-				+0.5
2,527,493	-				+0.3
2,527,526	+				+1.1
2,527,569	+				-2.5
2,527,620	+				+0.2
2,527,734	-				+1.1
2,527,888	-		OLJFJH_12020	0.16	+0.1
2,527,889	+		OLJFJH_12020	0.16	+0.4
2,527,983	-		OLJFJH_12020	0.23	+0.7
2,528,108	+		OLJFJH_12020	0.31	-0.0
2,528,108	+		OLJFJH_12020	0.31	-0.6
2,528,193	+		OLJFJH_12020	0.37	+1.0
2,528,194	-		OLJFJH_12020	0.37	-0.0
2,528,275	+		OLJFJH_12020	0.43	+0.7
2,528,276	-		OLJFJH_12020	0.43	+1.6
2,528,427	+		OLJFJH_12020	0.54	+1.6
2,528,427	+		OLJFJH_12020	0.54	-0.6
2,528,428	-		OLJFJH_12020	0.54	-0.5
2,528,430	-		OLJFJH_12020	0.54	+0.3
2,528,468	+		OLJFJH_12020	0.56	+0.7
2,528,504	+		OLJFJH_12020	0.59	+0.4
2,528,651	+		OLJFJH_12020	0.69	+3.2
2,528,652	-		OLJFJH_12020	0.69	+1.2
2,528,766	-		OLJFJH_12020	0.77	+1.6
2,528,768	+		OLJFJH_12020	0.77	+0.4
2,528,821	+		OLJFJH_12020	0.81	+1.6
2,528,913	+		OLJFJH_12020	0.87	+0.7
2,528,913	+		OLJFJH_12020	0.87	+0.3
2,528,914	-		OLJFJH_12020	0.88	+0.1
2,528,918	+		OLJFJH_12020	0.88	-1.3
2,528,976	+				+2.8
2,529,006	+				+0.3
2,529,006	+				+1.6
2,529,006	+				+0.4
2,529,090	+				+0.3
2,529,091	-				-0.6
2,529,118	+				+1.3
2,529,122	+				-0.0
2,529,123	-				-0.3
2,529,135	-				+0.2
2,529,162	+				+0.6
2,529,219	+				-2.3
2,529,220	-				+1.5
2,529,221	+				-1.7
2,529,277	-				-1.8
2,529,277	-				-1.0
2,529,358	+		OLJFJH_12025	0.13	-2.0
2,529,359	-		OLJFJH_12025	0.13	-1.9
2,529,408	+		OLJFJH_12025	0.18	-1.7
2,529,466	+		OLJFJH_12025	0.23	-1.2
2,529,497	+		OLJFJH_12025	0.26	-1.4
2,529,595	+		OLJFJH_12025	0.34	-2.1
2,529,676	+		OLJFJH_12025	0.41	-1.5
2,529,676	+		OLJFJH_12025	0.41	-2.0
2,529,677	-		OLJFJH_12025	0.41	-1.7
2,529,677	-		OLJFJH_12025	0.41	-2.3
2,529,677	-		OLJFJH_12025	0.41	-2.7
2,529,733	+		OLJFJH_12025	0.46	-0.6
2,529,734	-		OLJFJH_12025	0.46	-1.8
2,529,737	+		OLJFJH_12025	0.47	-2.3
2,529,737	+		OLJFJH_12025	0.47	-1.6
2,529,738	-		OLJFJH_12025	0.47	-1.7
2,529,738	-		OLJFJH_12025	0.47	-2.4
2,529,956	-		OLJFJH_12025	0.66	-2.5
2,530,002	+		OLJFJH_12025	0.70	-2.3