Experiment: Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-9
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_02475 and OLJFJH_02480 are separated by 82 nucleotides OLJFJH_02480 and OLJFJH_02485 are separated by 136 nucleotides OLJFJH_02485 and OLJFJH_02490 are separated by 3 nucleotides
OLJFJH_02475: OLJFJH_02475 - adenylosuccinate synthase, at 444,444 to 445,781
_02475
OLJFJH_02480: OLJFJH_02480 - DUF2065 domain-containing protein, at 445,864 to 446,004
_02480
OLJFJH_02485: OLJFJH_02485 - protease modulator HflC, at 446,141 to 447,145
_02485
OLJFJH_02490: OLJFJH_02490 - FtsH protease activity modulator HflK, at 447,149 to 448,402
_02490
Position (kb) 446
447
448 Strain fitness (log2 ratio) -2
-1
0
1
2 at 445.777 kb on - strand at 445.830 kb on - strand at 445.833 kb on + strand at 445.885 kb on + strand, within OLJFJH_02480 at 445.893 kb on - strand, within OLJFJH_02480 at 446.023 kb on + strand at 446.058 kb on + strand at 446.059 kb on - strand at 446.066 kb on + strand at 446.238 kb on + strand at 446.265 kb on + strand, within OLJFJH_02485 at 446.265 kb on + strand, within OLJFJH_02485 at 446.382 kb on + strand, within OLJFJH_02485 at 446.467 kb on + strand, within OLJFJH_02485 at 446.467 kb on + strand, within OLJFJH_02485 at 446.467 kb on + strand, within OLJFJH_02485 at 446.467 kb on + strand, within OLJFJH_02485 at 446.468 kb on - strand, within OLJFJH_02485 at 446.468 kb on - strand, within OLJFJH_02485 at 446.475 kb on + strand, within OLJFJH_02485 at 446.475 kb on + strand, within OLJFJH_02485 at 446.475 kb on + strand, within OLJFJH_02485 at 446.475 kb on + strand, within OLJFJH_02485 at 446.475 kb on + strand, within OLJFJH_02485 at 446.475 kb on + strand, within OLJFJH_02485 at 446.475 kb on + strand, within OLJFJH_02485 at 446.475 kb on + strand, within OLJFJH_02485 at 446.475 kb on + strand, within OLJFJH_02485 at 446.476 kb on - strand, within OLJFJH_02485 at 446.476 kb on - strand, within OLJFJH_02485 at 446.476 kb on - strand, within OLJFJH_02485 at 446.476 kb on - strand, within OLJFJH_02485 at 446.476 kb on - strand, within OLJFJH_02485 at 446.476 kb on - strand, within OLJFJH_02485 at 446.519 kb on - strand, within OLJFJH_02485 at 446.519 kb on - strand, within OLJFJH_02485 at 446.693 kb on + strand, within OLJFJH_02485 at 446.694 kb on - strand, within OLJFJH_02485 at 446.694 kb on - strand, within OLJFJH_02485 at 446.702 kb on - strand, within OLJFJH_02485 at 446.782 kb on + strand, within OLJFJH_02485 at 446.835 kb on + strand, within OLJFJH_02485 at 446.836 kb on - strand, within OLJFJH_02485 at 446.871 kb on + strand, within OLJFJH_02485 at 446.871 kb on + strand, within OLJFJH_02485 at 446.872 kb on - strand, within OLJFJH_02485 at 446.880 kb on - strand, within OLJFJH_02485 at 447.003 kb on + strand, within OLJFJH_02485 at 447.003 kb on + strand, within OLJFJH_02485 at 447.096 kb on + strand at 447.096 kb on + strand at 447.097 kb on - strand at 447.123 kb on - strand at 447.139 kb on + strand at 447.150 kb on + strand at 447.208 kb on + strand at 447.432 kb on + strand, within OLJFJH_02490 at 447.432 kb on + strand, within OLJFJH_02490 at 447.432 kb on + strand, within OLJFJH_02490 at 447.432 kb on + strand, within OLJFJH_02490 at 447.466 kb on + strand, within OLJFJH_02490 at 447.467 kb on - strand, within OLJFJH_02490 at 447.469 kb on - strand, within OLJFJH_02490 at 447.535 kb on - strand, within OLJFJH_02490 at 447.600 kb on + strand, within OLJFJH_02490 at 447.600 kb on + strand, within OLJFJH_02490 at 447.601 kb on - strand, within OLJFJH_02490 at 447.601 kb on - strand, within OLJFJH_02490 at 447.601 kb on - strand, within OLJFJH_02490 at 447.733 kb on - strand, within OLJFJH_02490 at 447.942 kb on - strand, within OLJFJH_02490 at 447.962 kb on - strand, within OLJFJH_02490 at 447.962 kb on - strand, within OLJFJH_02490 at 448.028 kb on - strand, within OLJFJH_02490 at 448.118 kb on - strand, within OLJFJH_02490 at 448.118 kb on - strand, within OLJFJH_02490 at 448.119 kb on + strand, within OLJFJH_02490 at 448.119 kb on + strand, within OLJFJH_02490 at 448.119 kb on + strand, within OLJFJH_02490 at 448.120 kb on - strand, within OLJFJH_02490 at 448.120 kb on - strand, within OLJFJH_02490 at 448.120 kb on - strand, within OLJFJH_02490 at 448.120 kb on - strand, within OLJFJH_02490 at 448.142 kb on - strand, within OLJFJH_02490
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-9 remove 445,777 - -1.6 445,830 - +0.4 445,833 + -1.0 445,885 + OLJFJH_02480 0.15 -0.4 445,893 - OLJFJH_02480 0.21 -0.8 446,023 + +0.8 446,058 + -1.5 446,059 - +0.3 446,066 + -0.5 446,238 + -0.9 446,265 + OLJFJH_02485 0.12 -0.0 446,265 + OLJFJH_02485 0.12 -0.6 446,382 + OLJFJH_02485 0.24 -0.8 446,467 + OLJFJH_02485 0.32 +0.3 446,467 + OLJFJH_02485 0.32 +0.5 446,467 + OLJFJH_02485 0.32 -1.0 446,467 + OLJFJH_02485 0.32 -2.4 446,468 - OLJFJH_02485 0.33 -0.6 446,468 - OLJFJH_02485 0.33 -1.7 446,475 + OLJFJH_02485 0.33 -0.2 446,475 + OLJFJH_02485 0.33 -0.9 446,475 + OLJFJH_02485 0.33 -1.2 446,475 + OLJFJH_02485 0.33 -1.1 446,475 + OLJFJH_02485 0.33 -1.5 446,475 + OLJFJH_02485 0.33 -0.8 446,475 + OLJFJH_02485 0.33 -0.9 446,475 + OLJFJH_02485 0.33 -1.0 446,475 + OLJFJH_02485 0.33 +0.2 446,476 - OLJFJH_02485 0.33 -1.1 446,476 - OLJFJH_02485 0.33 -0.9 446,476 - OLJFJH_02485 0.33 -2.3 446,476 - OLJFJH_02485 0.33 -0.1 446,476 - OLJFJH_02485 0.33 -0.4 446,476 - OLJFJH_02485 0.33 -0.9 446,519 - OLJFJH_02485 0.38 -1.1 446,519 - OLJFJH_02485 0.38 -0.4 446,693 + OLJFJH_02485 0.55 -1.2 446,694 - OLJFJH_02485 0.55 -0.7 446,694 - OLJFJH_02485 0.55 -0.9 446,702 - OLJFJH_02485 0.56 -1.0 446,782 + OLJFJH_02485 0.64 -0.4 446,835 + OLJFJH_02485 0.69 -1.5 446,836 - OLJFJH_02485 0.69 -1.0 446,871 + OLJFJH_02485 0.73 -0.7 446,871 + OLJFJH_02485 0.73 -0.8 446,872 - OLJFJH_02485 0.73 -0.5 446,880 - OLJFJH_02485 0.74 +0.1 447,003 + OLJFJH_02485 0.86 +1.0 447,003 + OLJFJH_02485 0.86 -1.3 447,096 + -0.7 447,096 + -0.8 447,097 - -0.6 447,123 - -0.7 447,139 + -0.5 447,150 + -0.2 447,208 + +1.9 447,432 + OLJFJH_02490 0.23 -1.1 447,432 + OLJFJH_02490 0.23 +0.2 447,432 + OLJFJH_02490 0.23 -0.4 447,432 + OLJFJH_02490 0.23 -1.0 447,466 + OLJFJH_02490 0.25 -0.4 447,467 - OLJFJH_02490 0.25 +0.3 447,469 - OLJFJH_02490 0.26 -0.7 447,535 - OLJFJH_02490 0.31 -0.3 447,600 + OLJFJH_02490 0.36 -1.0 447,600 + OLJFJH_02490 0.36 +0.1 447,601 - OLJFJH_02490 0.36 -1.4 447,601 - OLJFJH_02490 0.36 +0.8 447,601 - OLJFJH_02490 0.36 -0.1 447,733 - OLJFJH_02490 0.47 -2.1 447,942 - OLJFJH_02490 0.63 -1.0 447,962 - OLJFJH_02490 0.65 +0.1 447,962 - OLJFJH_02490 0.65 -0.6 448,028 - OLJFJH_02490 0.70 -0.4 448,118 - OLJFJH_02490 0.77 +0.5 448,118 - OLJFJH_02490 0.77 +0.8 448,119 + OLJFJH_02490 0.77 +1.2 448,119 + OLJFJH_02490 0.77 +0.8 448,119 + OLJFJH_02490 0.77 -0.2 448,120 - OLJFJH_02490 0.77 +0.3 448,120 - OLJFJH_02490 0.77 -1.2 448,120 - OLJFJH_02490 0.77 -0.5 448,120 - OLJFJH_02490 0.77 -0.3 448,142 - OLJFJH_02490 0.79 -0.7
Or see this region's nucleotide sequence